SwissProt::Q1CW50 has 568 amino acids
Query: Cas_Cas4 [M=161]
Accession: PF01930.21
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6.9e-20 57.9 0.0 1e-19 57.4 0.0 1.2 1 SwissProt::Q1CW50
Domain annotation for each sequence (and alignments):
>> SwissProt::Q1CW50
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 57.4 0.0 1e-19 1e-19 5 160 .. 37 208 .. 33 209 .. 0.87
Alignments for each domain:
== domain 1 score: 57.4 bits; conditional E-value: 1e-19
Cas_Cas4 5 inyyliCkrklwlfsh.eitmeeeselvelGkliheesykr.ekkevei.se....sikiDvvkkekeklvvvevKkskki........eea 81
++ +++C+r ++l + e+++++ ++v +G+ +h + ++ e+ e+e+ se ++++D+vk+++++lvv+e+K++++ ++
SwissProt::Q1CW50 37 LHALAYCERLFYLEEVeELRVAD--AAVFAGRRLHVQLQEEgEHVELELaSEalglHGRVDAVKTREGTLVVYEHKRGRHApggdapeaWPS 126
67899********9993444444..59999*****987777566788886669999***********************9999999875566 PP
Cas_Cas4 82 aklQllyYlllLekk..gieakGvleypkekkreevelteedreeleeaikeieeiisse.kppepkkkkiCkkCayaelCl 160
++lQ +Y+ll+e++ g ++ ++y+++ +++ l+++ r ++ a+ +++ + +s +pp ++++++C kC++a +Cl
SwissProt::Q1CW50 127 DRLQAGAYALLVEERfpGAPVECRVRYHQTDTTVRFPLDAALRGAVVAAVARARLLRASReRPPVTQEERKCAKCSLAPVCL 208
7************655599999********************************997654499******************8 PP
Or compare SwissProt::Q1CW50 to CDD or PaperBLAST