SwissProt::Q54F87 has 224 amino acids
Query: UPF0552 [M=224]
Accession: PF10574.13
Description: Arp2/3-interacting proteins Arpin
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.1e-30 91.9 0.9 3e-30 91.4 0.9 1.2 1 SwissProt::Q54F87
Domain annotation for each sequence (and alignments):
>> SwissProt::Q54F87
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 91.4 0.9 3e-30 3e-30 16 224 .] 3 223 .. 1 223 [. 0.82
Alignments for each domain:
== domain 1 score: 91.4 bits; conditional E-value: 3e-30
UPF0552 16 kneklagvwdpsayqrGaGvllegklvdvsrhsitDakgk.......keryyvlyikpsrihrrkfdakgkeiepnfsetkkvntGfLmssy 100
+++++g++++ + G+G ++eg l++ h++ + ++ +ry+++ i+ ++ +r++ g ei p+++ ++ + G+L+
SwissProt::Q54F87 3 SSTNYSGTFTKERFCGGDGFIVEGILQKHNIHTVFLQAKQplqdtvlPTRYVAITIEFDNAVKRNWK-DGVEIPPKMTRATAITKGYLNKFD 93
57899***************************99765554222222247****************96.57********************** PP
UPF0552 101 kveakgesDrlseeeLkklv...nktell.......kvtekhtpee.tlafwleeaeleklelekgdevrlktkGdsPfieslakldagtvt 181
+v+a + D+++ ++L+ + nk+ +l ++++ h +++ ++fw + +++ + +++gdevr+kt Gds f++s+ k+d+ +
SwissProt::Q54F87 94 RVQA-TLVDKINADQLSVAIsdgNKNSSLpsnfhddAIKNLHPNKKnYFEFWADVDKFSHKIFKSGDEVRIKTIGDSIFVDSVVKMDSNN-- 182
***6.578********99994433444433333333577777777779***************************************986.. PP
UPF0552 182 kcnfaGDekvGasWtdkimankskeeeaeetkeqGdgaeddeW 224
++nf+GD + G s++ +im + + e+++++ q + +ddeW
SwissProt::Q54F87 183 IANFSGDSNLGDSFASNIMKRYDQIESNNQQ--QQEEEDDDEW 223
68*****************965555554444..467889**** PP
Or compare SwissProt::Q54F87 to CDD or PaperBLAST