PaperBLAST – Find papers about a protein or its homologs

 

Align SwissProt::Q6NSV7 to PF12516 (DUF3719)

SwissProt::Q6NSV7 has 578 amino acids

Query:       DUF3719  [M=66]
Accession:   PF12516.12
Description: Protein of unknown function (DUF3719)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------          -----------
    2.3e-32   96.9   0.4      5e-32   95.8   0.4    1.6  1  SwissProt::Q6NSV7  


Domain annotation for each sequence (and alignments):
>> SwissProt::Q6NSV7  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   95.8   0.4     5e-32     5e-32       1      66 []     116     181 ..     116     181 .. 0.98

  Alignments for each domain:
  == domain 1  score: 95.8 bits;  conditional E-value: 5e-32
            DUF3719   1 lLfEgKvsaqtqnLqaECqeWarrfpHLRilGrqlilPtDEGfqhyq.ssapssasseallsaeees 66 
                        lL+E+++sa+tq+Lq+ECq+Wa++fpHLRilGrq+i+P+ EG+++y+ s++++sas+ea+ls+e+es
  SwissProt::Q6NSV7 116 LLYEQQLSAHTQGLQKECQQWAASFPHLRILGRQIITPS-EGYGLYPrSPSAVSASHEATLSQERES 181
                        69*************************************.***********************9976 PP



Or compare SwissProt::Q6NSV7 to CDD or PaperBLAST