SwissProt::Q6ZS30 has 2694 amino acids
Query: DUF4704 [M=486] Accession: PF15787.9 Description: Neurobeachin/BDCP, DUF4704 alpha solenoid region Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 2.3e-37 114.9 4.0 2.3e-37 114.9 4.0 3.7 3 SwissProt::Q6ZS30 Domain annotation for each sequence (and alignments): >> SwissProt::Q6ZS30 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -4.2 0.4 0.29 0.29 299 357 .. 66 124 .. 62 150 .. 0.63 2 ? -0.9 0.2 0.031 0.031 405 437 .. 293 325 .. 231 407 .. 0.57 3 ! 114.9 4.0 2.3e-37 2.3e-37 18 320 .. 859 1173 .. 854 1291 .. 0.81 Alignments for each domain: == domain 1 score: -4.2 bits; conditional E-value: 0.29 DUF4704 299 aiRllaLkllgklllrspvkrksevmeaknlfsliserLllfseeltdktynvLfevll 357 + R++ L+++ k+ + +++ ++ + f+++ ++L+ +e t + n+ + + SwissProt::Q6ZS30 66 VLRIQLLQCVQKMADGLEEQQQALSILLVKFFIILCRNLSNVEEIGTCSYINYVITMTT 124 56888888888888888877777777777777777777777775555555555544444 PP == domain 2 score: -0.9 bits; conditional E-value: 0.031 DUF4704 405 kiLsdllvLlksnrenrrallqmsvWqewLval 437 +iL++ Ll+s +++ + +W++ ++al SwissProt::Q6ZS30 293 TILENYFKLLNSDHSALPNQRRSRQWENRFIAL 325 456666666666655555555555555444443 PP == domain 3 score: 114.9 bits; conditional E-value: 2.3e-37 DUF4704 18 vvthsiqsilesvGGiqvLfPLfsqldqaeedeqlege..........................seadeklcatlleliaelleesetnq 81 vv +i++i++++GG +vLfPL++q+ + +e + e++ s + +l+at + ++++ ++ ++ nq SwissProt::Q6ZS30 859 VVNWDIKDIINCIGGLNVLFPLLEQISHFSEGQIPEEKnestvpesvtpvegdwlvwtstkaseSRLERNLVATFILIVKHFIQRHPINQ 948 78889***********************99987555557789*******************9999999********************** PP DUF4704 82 qqllrlkGflvlsflLqsvspkhLtlevlsalksllkvlkslanselLlkdlvdsillnpklWiytdyeVQkeLysyLatdfvsdkkilt 171 +l++++G++ l+ lLq+v+++ + ++vl a++ l++++ sl ++ +Ll+++ +++l+++++W + d+ +yL+t++ ++ ++ SwissProt::Q6ZS30 949 GNLIHSHGVATLGALLQKVPSTLMDVNVLMAVQLLIEQV-SLEKNMQLLQQMYQYLLFDFRIWNRGDFPFRIGHIQYLSTIIKDSRRV-- 1035 **************************************9.6668***************************************99866.. PP DUF4704 172 nlrrvstVlrlldilkqfYwvenaksksgvtskslleeRpsqeeilklrallLslieqlvrksseisesevkalinyletvqddenvedv 261 r+ +V+ lld+l+ +Y ++ s ++i ++r l li+ + k+ s +e+++++ y++ ++++e++ + SwissProt::Q6ZS30 1036 -FRKKYGVQFLLDTLRIYYGNGC-----KYN-------ELSLDDIRTIRTSLYGLIKYFLCKG--GSHEEIQSIMGYIAATNEEEQLFGI 1110 .89999999**********8652.....222.......33678********************..99*********************** PP DUF4704 262 Lelvirllseks...asflealdskggieiflkLLsre..seaiRllaLkllgklllrspvkrk 320 L+ + +ll ++ + fl ++ g +i+ LL ++ s R + k++ ++l+ v SwissProt::Q6ZS30 1111 LDVLFSLLRTSPtrgQLFLLLFEP-GNADILYALLLNQkySDRLREIIFKIMEQMLKCTNVYER 1173 **********99895666666655.556777777755411566677788999888875554332 PP
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