PaperBLAST – Find papers about a protein or its homologs

 

Align SwissProt::Q7KVH9 to PF05527 (DUF758)

SwissProt::Q7KVH9 has 188 amino acids

Query:       DUF758  [M=181]
Accession:   PF05527.15
Description: Domain of unknown function (DUF758)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------          -----------
    5.9e-79  250.3   2.2    6.6e-79  250.1   2.2    1.0  1  SwissProt::Q7KVH9  


Domain annotation for each sequence (and alignments):
>> SwissProt::Q7KVH9  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  250.1   2.2   6.6e-79   6.6e-79       1     180 [.       6     185 ..       6     186 .. 0.99

  Alignments for each domain:
  == domain 1  score: 250.1 bits;  conditional E-value: 6.6e-79
             DUF758   1 fsskslalraqKkllskmasksvaklfiddtsselldelyrlakeytknkkeaeklvKnliKivvKvgvllrnkqfsaeelalaekfrkklr 92 
                        f+s+++ lraqKk+ls+ma+k++ak+fid t+++lld+lyrl+k++t+nk +aekl+Kn+iKiv+K+gvl+rn+qfs+eel++ae f++k++
  SwissProt::Q7KVH9   6 FKSHDIGLRAQKKILSRMATKNIAKTFIDGTTASLLDNLYRLCKMHTGNKAKAEKLIKNIIKIVIKIGVLHRNNQFSDEELQKAELFKRKFQ 97 
                        89****************************************************************************************** PP

             DUF758  93 qlamtaisfyevdftfdkavLakllkecrdlllqlverhLtdkslgrikhvfdffanpefLeklfkpdeeyrehlkkivddlnkllee 180
                        ++ +++isfyevdftfd  +L k ++e++ +l+++v++hLt+kslgri++vfdff+++++Le+ f+pd++yre ++kiv+d+n ++e+
  SwissProt::Q7KVH9  98 NTQLSIISFYEVDFTFDLPYLQKSIAESQVALKSIVQPHLTEKSLGRIDEVFDFFGEEALLETAFRPDSPYREVMGKIVADINAAMET 185
                        *************************************************************************************997 PP



Or compare SwissProt::Q7KVH9 to CDD or PaperBLAST