PaperBLAST – Find papers about a protein or its homologs

 

Align SwissProt::Q9BY64 to PF06722 (EryCIII-like_C)

SwissProt::Q9BY64 has 529 amino acids

Query:       EryCIII-like_C  [M=145]
Accession:   PF06722.18
Description: Erythromycin biosynthesis protein CIII-like, C-terminal domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------          -----------
    7.7e-20   57.5   0.0    1.3e-19   56.8   0.0    1.3  1  SwissProt::Q9BY64  


Domain annotation for each sequence (and alignments):
>> SwissProt::Q9BY64  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   56.8   0.0   1.3e-19   1.3e-19      28     126 ..     346     446 ..     322     457 .. 0.87

  Alignments for each domain:
  == domain 1  score: 56.8 bits;  conditional E-value: 1.3e-19
                        S--SSEEE--S--HHHHG..GG-SEEEE---HHHHHHHHHTT--EEE---SHHHHHHHHHHHHHTSEEE--TTT--HHHHHHHHHHHHH-HH CS
     EryCIII-like_C  28 slPdnvRlvdfvPlgvlL..ptcaaivhhGGaGstltalhaGvPqivlpdgaDrlvraqrvaelGaGialpkdeldadslaeavarvledpa 117
                        +l  n Rl +++P  +lL  p++ a++ hGGa     a+ +G+P + +p ++D++ +  ++++ Ga + l  +++ +  l +a++ v++dp+
  SwissProt::Q9BY64 346 ALGLNTRLYKWIPQNDLLglPKTRAFITHGGANGIYEAIYHGIPMVGIPLFWDQPDNIAHMKAKGAAVRLDFHTMSSTDLLNALKTVINDPS 437
                        455699***********64489********************************************************************** PP

                        HHHHHHHHH CS
     EryCIII-like_C 118 yreaaakla 126
                        y+e+  kl 
  SwissProt::Q9BY64 438 YKENVMKLS 446
                        ****99986 PP



Or compare SwissProt::Q9BY64 to CDD or PaperBLAST