PaperBLAST – Find papers about a protein or its homologs

 

Align SwissProt::Q9UTC4 to PF08550 (DUF1752)

SwissProt::Q9UTC4 has 873 amino acids

Query:       DUF1752  [M=28]
Accession:   PF08550.14
Description: Fungal protein of unknown function (DUF1752)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------          -----------
    7.2e-16   44.1   4.0    1.7e-15   42.9   4.0    1.7  1  SwissProt::Q9UTC4  


Domain annotation for each sequence (and alignments):
>> SwissProt::Q9UTC4  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   42.9   4.0   1.7e-15   1.7e-15       1      28 []     314     341 ..     314     341 .. 0.98

  Alignments for each domain:
  == domain 1  score: 42.9 bits;  conditional E-value: 1.7e-15
            DUF1752   1 lWkvytkckdslpngeRLENlSWRlWnk 28 
                        +W+ +tk+k +++ng RLEN+SWR+W+k
  SwissProt::Q9UTC4 314 SWREITKTKANYDNGIRLENASWRTWMK 341
                        8*************************98 PP



Or compare SwissProt::Q9UTC4 to CDD or PaperBLAST