PaperBLAST – Find papers about a protein or its homologs

 

Align SwissProt::Q9XC67 to PF06722 (EryCIII-like_C)

SwissProt::Q9XC67 has 461 amino acids

Query:       EryCIII-like_C  [M=145]
Accession:   PF06722.18
Description: Erythromycin biosynthesis protein CIII-like, C-terminal domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------          -----------
    1.7e-21   62.9   0.1    2.9e-21   62.1   0.1    1.3  1  SwissProt::Q9XC67  


Domain annotation for each sequence (and alignments):
>> SwissProt::Q9XC67  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   62.1   0.1   2.9e-21   2.9e-21      25     136 ..     336     447 ..     325     456 .. 0.93

  Alignments for each domain:
  == domain 1  score: 62.1 bits;  conditional E-value: 2.9e-21
                        S-SS--SSEEE--S--HHHHGGG-SEEEE---HHHHHHHHHTT--EEE---SHHHHHHHHHHHHHTSEEE--TTT--HHHHHHHHHHHHH-H CS
     EryCIII-like_C  25 dlaslPdnvRlvdfvPlgvlLptcaaivhhGGaGstltalhaGvPqivlpdgaDrlvraqrvaelGaGialpkdeldadslaeavarvledp 116
                        dl+ lP+nv + dfvPlg++Lp ++ +v hGG+ + + al +GvP + +p+  +  + a+r+ael  G  l + e++a++l+   +rvl d 
  SwissProt::Q9XC67 336 DLGPLPENVLVRDFVPLGDVLPHTDLLVNHGGTSTAMEALAHGVPIVAMPEMPEPRATARRIAELDLGDWLLPGEVTAEKLSGIAQRVLTDD 427
                        7899**************************************************************************************** PP

                        HHHHHHHHHHHHHHTS--HH CS
     EryCIII-like_C 117 ayreaaaklaeealaePkPt 136
                          r++  +++ e      P+
  SwissProt::Q9XC67 428 RIRKGLDRMRGEIRRAGGPA 447
                        **********9987666665 PP



Or compare SwissProt::Q9XC67 to CDD or PaperBLAST