U6CWZ8 has 1921 amino acids
Query: ZnF_RZ-type [M=54]
Accession: PF20173.2
Description: RZ type zinc finger domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
7.5e-26 75.9 1.1 7.5e-26 75.9 1.1 4.3 5 U6CWZ8
Domain annotation for each sequence (and alignments):
>> U6CWZ8
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -2.6 1.2 0.24 0.24 22 37 .. 1441 1455 .. 1439 1461 .. 0.77
2 ? -11.5 9.5 1 1 23 40 .. 1484 1492 .. 1480 1508 .. 0.47
3 ? -5.3 8.6 1 1 16 39 .. 1549 1570 .. 1547 1571 .. 0.85
4 ? -3.6 0.2 0.48 0.48 33 41 .. 1621 1629 .. 1617 1629 .. 0.85
5 ! 75.9 1.1 7.5e-26 7.5e-26 7 53 .. 1843 1891 .. 1837 1892 .. 0.91
Alignments for each domain:
== domain 1 score: -2.6 bits; conditional E-value: 0.24
ZnF_RZ-type 22 igeCGrameesrCpeC 37
+ +CG++ ++C C
U6CWZ8 1441 VLDCGHPCP-GSCHSC 1455
679999985.567777 PP
== domain 2 score: -11.5 bits; conditional E-value: 1
ZnF_RZ-type 23 geCGrameesrCpeCgat 40
ge Cp C++t
U6CWZ8 1484 GE---------CPPCQRT 1492
44.........4444332 PP
== domain 3 score: -5.3 bits; conditional E-value: 1
ZnF_RZ-type 16 nGHpYvigeCGrameesrCpeCga 39
+GHp+ ig CG++ ++C C++
U6CWZ8 1549 CGHPC-IGLCGEPCP-KKCRVCHQ 1570
89*98.8******96.58999986 PP
== domain 4 score: -3.6 bits; conditional E-value: 0.48
ZnF_RZ-type 33 rCpeCgatI 41
Cp C+ +I
U6CWZ8 1621 VCPVCQVPI 1629
7****9987 PP
== domain 5 score: 75.9 bits; conditional E-value: 7.5e-26
ZnF_RZ-type 7 g..tghwYkCpnGHpYvigeCGrameesrCpeCgatIGGeshnlaagnt 53
g +ghw+kCpnGH+Yvi +CG+am+++ Cp+C++ IGG +h+l+++n+
U6CWZ8 1843 GfpRGHWFKCPNGHIYVISDCGGAMQRGVCPDCKEVIGGINHTLERSNQ 1891
3458*****************************************9997 PP
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