VIMSS100319 has 188 amino acids
Query: SocA_Panacea [M=114]
Accession: PF13274.10
Description: Antitoxin SocA-like, Panacea domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.7e-20 59.7 0.0 7.5e-20 58.3 0.0 1.7 1 VIMSS100319
Domain annotation for each sequence (and alignments):
>> VIMSS100319
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 58.3 0.0 7.5e-20 7.5e-20 1 113 [. 36 139 .. 36 140 .. 0.80
Alignments for each domain:
== domain 1 score: 58.3 bits; conditional E-value: 7.5e-20
SocA_Panacea 1 LqKllYladalslkkygkpltgdeyeawkyGPVvpevydeikgkkgkpieeseeefedeklekeekeeveeeeegeenelseeekeildeviekykd 97
LqKllY+a++ l + g+pl++ +eawk+GPV+p vy ++++++ k+i++++ ++++ l+ ++ v+ ++ +e +++v+ ++++
VIMSS100319 36 LQKLLYFAHGRFLVDKGRPLVNGFFEAWKFGPVHPVVYRCFSANGPKYIINRA--IKKDILSG-LHIIVSPP-------RDQDIHEGIERVLLTMGR 122
9******************************************9988765552..22222333.22222211.......34555566********** PP
SocA_Panacea 98 lsakeLselthkek.aW 113
+sa++L+ +h + +W
VIMSS100319 123 MSASQLVAVSHASGgPW 139
*************9999 PP
Or compare VIMSS100319 to CDD or PaperBLAST