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Align VIMSS10078678 to PF06749 (DUF1218)

VIMSS10078678 has 204 amino acids

Query:       DUF1218  [M=95]
Accession:   PF06749.16
Description: Protein of unknown function (DUF1218)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
      2e-15   43.4  10.8    4.5e-14   39.0   7.7    2.2  2  VIMSS10078678  


Domain annotation for each sequence (and alignments):
>> VIMSS10078678  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !    5.5   0.0    0.0013    0.0013      31      86 ..      13      63 ..       2      65 .. 0.70
   2 !   39.0   7.7   4.5e-14   4.5e-14       1      95 []      66     156 ..      66     156 .. 0.85

  Alignments for each domain:
  == domain 1  score: 5.5 bits;  conditional E-value: 0.0013
        DUF1218 31 krtlavvffvlswitfaiAealllaGaslnakhtkenhrqleesCytlkkgvFaaa 86
                     t+ +v+ vl++ + ++A  + l + ++ ++ ++     ++ +C+   k  F+ +
  VIMSS10078678 13 IITVIIVCIVLTVGLDIVAGFVGLQAQAAQQYVKH-----DKLECKAPSKTAFVLG 63
                   45667777777777777777777777777776666.....5789999999999865 PP

  == domain 2  score: 39.0 bits;  conditional E-value: 4.5e-14
        DUF1218   1 Aavllllaqvianvvsgcl.....ccgkelspssakrtlavvffvlswitfaiAealllaGaslnakhtkenhrqleesCytlkkgvFaaaailsl 91 
                    A+ +l++a+v anv+++ +     ++g +l +++  +++ +++++l w++ ++++++l+ G+++n++++         +C++ +++vF++++ +++
  VIMSS10078678  66 AVSCLATAHVSANVIGCSIsnlfqALG-ALPKNKITTYFNMACLFLIWVVGIFGALILANGIWSNTESRI--------RCRFTNNHVFSIGGKVCF 152
                    789***********7776687442233.4444456999****************************7777........7***************** PP

        DUF1218  92 vtal 95 
                    ++a+
  VIMSS10078678 153 LHAI 156
                    *985 PP



Or compare VIMSS10078678 to CDD or PaperBLAST