VIMSS10079879 has 358 amino acids
Query: PDH_N [M=154]
Accession: PF02153.21
Description: Prephenate dehydrogenase, nucleotide-binding domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5e-14 38.3 0.0 3e-13 35.7 0.0 2.0 2 VIMSS10079879
Domain annotation for each sequence (and alignments):
>> VIMSS10079879
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 35.7 0.0 3e-13 3e-13 7 153 .. 79 222 .. 73 223 .. 0.80
2 ? 0.0 0.0 0.03 0.03 103 124 .. 319 340 .. 295 345 .. 0.72
Alignments for each domain:
== domain 1 score: 35.7 bits; conditional E-value: 3e-13
PDH_N 7 rkgfkvtvigydideekakaalelglvdeatddieavkea.divllavPvevilevlkelap.hlkedalitDvgsvKekvvkelekllk.gksfv 99
r+g + +i ++++ + +aa +g+ + ++ + ++ d+vll++ + ++ vl+ l+++ l +Dv svKe + k l+ + +
VIMSS10079879 79 RHG--HDLITHSRSDYS-DAANSIGARFFDNP-HDLCEQHpDVVLLCTSILSTESVLRSFPFqRLRRSTLFVDVLSVKEFPKALFIKYLPkEFDIL 170
555..555555555554.55669999998887.57777767*****************996558**************************9999** PP
PDH_N 100 gghPmaGteksGvdaareelfenavviLtPtektdkealelvkelleevgarvi 153
+hPm+G+ +sG + + f +v + + + + +e+ e+ +++e+ g +++
VIMSS10079879 171 CTHPMFGP-ESGKHSWSGLPFVYDKVRIGDAA-SRQERCEKFLRIFENEGCKMV 222
********.78887777777777777777776.555888888888888887765 PP
== domain 2 score: 0.0 bits; conditional E-value: 0.03
PDH_N 103 PmaGteksGvdaareelfenav 124
m+G+e + +++++++l+++
VIMSS10079879 319 QMFGGEVQSPKKTEQKLLNDGG 340
4999999999999999998765 PP
Or compare VIMSS10079879 to CDD or PaperBLAST