VIMSS10080200 has 1014 amino acids
Query: DUF4378 [M=166]
Accession: PF14309.10
Description: Domain of unknown function (DUF4378)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.7e-40 125.3 3.3 1.7e-40 125.3 3.3 3.0 3 VIMSS10080200
Domain annotation for each sequence (and alignments):
>> VIMSS10080200
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 2.1 0.0 0.012 0.012 70 116 .. 118 159 .. 96 198 .. 0.69
2 ? -2.8 0.1 0.4 0.4 90 122 .. 765 797 .. 745 806 .. 0.61
3 ! 125.3 3.3 1.7e-40 1.7e-40 1 166 [] 816 991 .. 816 991 .. 0.81
Alignments for each domain:
== domain 1 score: 2.1 bits; conditional E-value: 0.012
DUF4378 70 iLveilelfkrsfsyppskvssassrrrpkklsgeelleevwseirs 116
L+e+l++ +++ +s+vs +ss+++ ++ ++e+ +ev+ ei+
VIMSS10080200 118 GLSEKLTR---LSTE-CSRVSFSSSCSSS-SPLSSEVNREVQPEISA 159
46777653...3333.3355555555333.37777888888888874 PP
== domain 2 score: -2.8 bits; conditional E-value: 0.4
DUF4378 90 ssassrrrpkklsgeelleevwseirswlspes 122
++++s + +++ ++ + +e++ ++++++ s+ +
VIMSS10080200 765 KTTTSFSPEMNRKKLQNVEHLVQKLKRLNSSHD 797
344444455555566668888888887666653 PP
== domain 3 score: 125.3 bits; conditional E-value: 1.7e-40
DUF4378 1 eleYvrdiLeasglllkd..sdellsrwhssespldpslfeeleekkgsaseeetresrserklLFDlvneiLveilelfkrsfsyppskvssass 94
+++Y+++iL+asglll+d s + h s++p++p+lf +e++kg++s++ +++++rkl+FD+vne+L ++l+ f +s+ +p++k +a+
VIMSS10080200 816 DHRYISEILLASGLLLRDlgSGLTTFQLHPSGHPINPELFLVIEQTKGCSSSS---NEKINRKLVFDAVNEMLGKKLA-FVESYVDPWMK--QAKA 905
79****************874445556778888**************975444...59******************99.54555555555..5555 PP
DUF4378 95 rrrpkklsgeelleevwseirswlspe..........selvlde...........lvdkdlssregkwldledeveeigleierlIledLveE 166
r +k ls ++ll+e++sei+ + +++ + e ++d+d++ +++kw+d++d +++++l++erl+++dLv+E
VIMSS10080200 906 R--KKVLSAQNLLKELCSEIEILQKQAkkrsenllllE-----EeeeeeedflkcILDEDMAIQSEKWTDFDDAIPGLVLDMERLLFKDLVKE 991
4..7789**************65555566666444441.....344444578888************************************98 PP
Or compare VIMSS10080200 to CDD or PaperBLAST