PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS10080558 to PF04783 (DUF630)

VIMSS10080558 has 953 amino acids

Query:       DUF630  [M=59]
Accession:   PF04783.16
Description: Protein of unknown function (DUF630)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    9.2e-31   92.2   0.2    2.5e-29   87.6   0.3    2.8  2  VIMSS10080558  


Domain annotation for each sequence (and alignments):
>> VIMSS10080558  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   87.6   0.3   2.5e-29   2.5e-29       1      59 []       1      59 [.       1      59 [. 0.99
   2 ?    1.1   0.0     0.025     0.025       5      26 ..     778     799 ..     776     818 .. 0.83

  Alignments for each domain:
  == domain 1  score: 87.6 bits;  conditional E-value: 2.5e-29
         DUF630  1 MGcaaSklddeeavalCreRkrllkqaveaRyaLAaaHvaYlqSLrnvgaaLrrFaeee 59
                   MGc  Sk+dd++ v lCreRk+l+k+a ++R+aLAaaH++Y+qSL +vg++++rF++ee
  VIMSS10080558  1 MGCGGSKVDDQPLVILCRERKQLIKAASHHRCALAAAHLSYFQSLCDVGDSIKRFVDEE 59
                   ********************************************************987 PP

  == domain 2  score: 1.1 bits;  conditional E-value: 0.025
         DUF630   5 aSklddeeavalCreRkrllkq 26 
                     S++   ++  +C+++++ + +
  VIMSS10080558 778 PSRVGAPQVFVICKDWQEAMAR 799
                    68999999999******99976 PP



Or compare VIMSS10080558 to CDD or PaperBLAST