PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS10081361 to PF00697 (PRAI)

VIMSS10081361 has 213 amino acids

Query:       PRAI  [M=193]
Accession:   PF00697.26
Description: N-(5'phosphoribosyl)anthranilate (PRA) isomerase
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.7e-22   66.2   0.0    2.4e-22   65.7   0.0    1.2  1  VIMSS10081361  


Domain annotation for each sequence (and alignments):
>> VIMSS10081361  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.7   0.0   2.4e-22   2.4e-22       1     128 [.      68     200 ..      68     208 .. 0.87

  Alignments for each domain:
  == domain 1  score: 65.7 bits;  conditional E-value: 2.4e-22
           PRAI   1 akicgltrasdvkkavkagadylglifsesskrevseesaqellekvpae...lVgVfvNqpieevlrlakelgLdvvQLHGdedqeyenllktel 93 
                    +k+cg+t+a d++ av+agad++g+i  ++skr++s  +a+ + + ++      VgVfv+ + +++lr a++++L++vQLHG+ ++++ ++l  e 
  VIMSS10081361  68 VKMCGITSARDAAMAVEAGADFIGMIIWPHSKRSISLSVAKDISQVAREGgakPVGVFVEDDENTILRAADSSDLELVQLHGNSSRAAFSRLVRER 163
                    589*************************************99988888545559******************************7777777777** PP

           PRAI  94 pvikalkvaesvd..evkearradnvdlvLlDseaGG 128
                    +vi  l  +e+ +  +v + ++ + +d +L+Ds +GG
  VIMSS10081361 164 KVIYVLNANEDGKllNVVPEEDGHLADWILVDSATGG 200
                    **********9995334444444445*******9888 PP



Or compare VIMSS10081361 to CDD or PaperBLAST