VIMSS10081906 has 573 amino acids
Query: PGG [M=116]
Accession: PF13962.10
Description: Domain of unknown function
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.3e-33 101.5 2.5 1.3e-33 101.5 2.5 3.0 3 VIMSS10081906
Domain annotation for each sequence (and alignments):
>> VIMSS10081906
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 0.6 0.1 0.026 0.026 62 80 .. 294 313 .. 290 331 .. 0.64
2 ! 101.5 2.5 1.3e-33 1.3e-33 3 114 .. 391 498 .. 389 500 .. 0.93
3 ? -2.2 2.8 0.19 0.19 66 113 .. 512 557 .. 510 560 .. 0.63
Alignments for each domain:
== domain 1 score: 0.6 bits; conditional E-value: 0.026
PGG 62 iAlvaSlvavvlll.isslv 80
+A+++S+ +v++ + +++ +
VIMSS10081906 294 TAVMSSCYSVIVSItYETTI 313
79999999999998333332 PP
== domain 2 score: 101.5 bits; conditional E-value: 1.3e-33
PGG 3 klkearntlllvAtLiatvtFaAgftlPGGywqddskssaGkpilakkkafkvFvvsnaiAlvaSlvavvlllisslvedeakslkkklrvllvll 98
l +arnt+++vA+Lia+v+F++g+++PGG++q+ + +Gk+++ + af+vF +sn iAl++Sl++v+ll+ s++ +++ lk++l++++ +l
VIMSS10081906 391 ALLNARNTITIVAVLIASVAFTCGINPPGGVYQEG--PYKGKSTAGRTLAFQVFSISNNIALFTSLCIVILLV--SIIPYRTRPLKNFLKLTHRIL 482
67899**************************9997..78******8888************************..4578999************** PP
PGG 99 vlallsllvAFaagly 114
++a++s+++A++++++
VIMSS10081906 483 WVAVASMALAYVSAAS 498
************9876 PP
== domain 3 score: -2.2 bits; conditional E-value: 0.19
PGG 66 aSlvavvlllisslvedeakslkkklrvllvllvlallsllvAFaagl 113
+ ++++ l++ l + +++ ++l ++++ ++ ++ AF++ +
VIMSS10081906 512 TTVLSISTLMLGGLFAFMTYKV--IRHWLKKMTFNPMMIIMSAFTSIS 557
5555666666445533444444..458888999999999999998765 PP
Or compare VIMSS10081906 to CDD or PaperBLAST