VIMSS10091816 has 2946 amino acids
Query: DUF4704 [M=486]
Accession: PF15787.9
Description: Neurobeachin/BDCP, DUF4704 alpha solenoid region
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1e-68 218.3 1.0 3.5e-56 177.0 0.1 2.2 2 VIMSS10091816
Domain annotation for each sequence (and alignments):
>> VIMSS10091816
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 177.0 0.1 3.5e-56 3.5e-56 4 298 .. 653 958 .. 650 960 .. 0.91
2 ! 39.9 0.1 1.2e-14 1.2e-14 343 483 .. 1152 1291 .. 1126 1294 .. 0.80
Alignments for each domain:
== domain 1 score: 177.0 bits; conditional E-value: 3.5e-56
DUF4704 4 vhspealilngvqlvvthsiqsilesv..GGiqvLfPLfsqldqaeedeqlege...seadeklcatlleliaelleesetnqqqllrlkGflvls 94
+ ++ a++l++v++++++++ ++ +++ GG+++L+PL ++ ++++ e+ g+ s ++ +l+a ++++++ +++ ++ n+++l+r++G+++l+
VIMSS10091816 653 TLRRPAEVLGQVHVATRMKPVESFWALayGGPMSLLPLTVSSVHKDSLEPCLGNlplSLSTVTLAAPVFRIMSVAIQ-HPGNNEELCRTQGPEILA 747
66889********************8766*********************99999*99**************99999.***************998 PP
DUF4704 95 ....flLqsvspkhLtlevlsalksllkvlksl..an..selLlkdlvdsillnpklWiytdyeVQkeLysyLatdfvsdkkiltnlrrvstVlrl 182
+lL s+ + + + + + ++l+++++sl ++ +++L ++l+ +ll++k+W ++y +Qk+L+s+L ++++++ t +r++ +++ l
VIMSS10091816 748 rilsYLLHSLASLDRKHDGVGE-EELVAAIVSLcqSQkiNHVLKVQLFRTLLLDLKIWSLCNYGLQKKLLSSLQDMVFTEA---TAMRDAEAIQLL 839
7777888888777776666654.5555555555454478*****************************************7...99********** PP
DUF4704 183 ldilkqfYwvenaksksgvtskslleeRpsqeeilklrallLslieqlvrks.seisesevkalinyletvqddenvedvLelvirllseks.... 273
ld ++++Yw+ +k++ t++ l+++ ++ e+++l + lL++ie l+ + + ++++++ l+ ++ ++ + ++v++vL+l++rl+++++
VIMSS10091816 840 LDGCRRCYWMI--SEKDSETTFPLDGNTRQMGELNALIDELLVIIELLMGAAsPSLAADDLRRLLGFIIDSPQPNQVARVLHLMYRLVVQPNaara 933
*********97..799999******************************98736899**********************************77788 PP
DUF4704 274 asflealdskggieiflkLLsrese 298
+ f+e + +ggie++l LL+re++
VIMSS10091816 934 QMFAEVFITSGGIETLLVLLQREAK 958
99999*****************986 PP
== domain 2 score: 39.9 bits; conditional E-value: 1.2e-14
DUF4704 343 eltdktynvLfevllekaspkivlekhsepekssklelPqilkviakllsqskdsesielrkkiLsdllvLlksnrenrrallqmsvWqewLva 436
+td++y +L ++++ s++ + + ++ ++e+ q+l v+++ l+++++ l+ + L+dll L s +enr +l m++W ew+++
VIMSS10091816 1152 LMTDNVYTTLLGASINASSTE---DGLNFYDSGHRFEHSQLLLVLLRSLPSASK----ALQSRALQDLLFLACSHPENRSSLTTMEEWPEWILE 1238
455556655555555554443...444556667999999999999999999988....478999****************************** PP
DUF4704 437 laklaeikeee.......eseikelvielfkvLlvhalktekgGwrvlvdtlai 483
++ ++ k++ + e+++++ + + ++l h++ k+Gw++++ t+ +
VIMSS10091816 1239 ILISNYEKDAGkqsasvgSCEVEDMIHNFLIIMLEHSM-RQKDGWKDIEATIHC 1291
988777766666889986699*****************.889*******99977 PP
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