VIMSS10092390 has 354 amino acids
Query: GLTSCR1 [M=102]
Accession: PF15249.10
Description: Conserved region of unknown function on GLTSCR protein
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.7e-30 90.4 0.2 4.7e-30 90.4 0.2 4.1 5 VIMSS10092390
Domain annotation for each sequence (and alignments):
>> VIMSS10092390
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -4.9 10.0 1 1 59 96 .. 6 44 .. 1 49 [. 0.49
2 ? 2.6 2.4 0.01 0.01 74 96 .. 90 112 .. 74 118 .. 0.63
3 ! 90.4 0.2 4.7e-30 4.7e-30 1 101 [. 129 242 .. 129 244 .. 0.95
4 ? -1.7 0.0 0.22 0.22 60 82 .. 247 269 .. 241 280 .. 0.50
5 ? -2.3 0.1 0.35 0.35 75 97 .. 316 338 .. 310 342 .. 0.61
Alignments for each domain:
== domain 1 score: -4.9 bits; conditional E-value: 1
GLTSCR1 59 qkllnkyrrll.lreskrespseeevmlerllleeerae 96
q++l++ + ll ++++++ ++ +++++l + l ++++++
VIMSS10092390 6 QQQLQQQQLLLqMQQQQQMQQRQQQLFLMQHLQKQQQQQ 44
333344343330444445566666666666554444443 PP
== domain 2 score: 2.6 bits; conditional E-value: 0.01
GLTSCR1 74 krespseeevmlerllleeerae 96
+++++++ ++m++++ l++++++
VIMSS10092390 90 QQQQQQQMMMMMQQQQLQQQQQQ 112
34555666677777666666553 PP
== domain 3 score: 90.4 bits; conditional E-value: 4.7e-30
GLTSCR1 1 dqkavlnPdvktpFasleDAvkRLlPYHvfqepkedeedleka..............deefekvatellkrfqkllnkyrrlllreskrespseee 82
d+++v++Pd+k+pFasleDA++RLlPYHv+++++ +e+d + d+++ +++ e++++f+ +++ + r+++++s+ + ee+
VIMSS10092390 129 DAWRVCHPDFKRPFASLEDACERLLPYHVVADYEAEEDDSIFDsnttsqtlprcqqwDNNIAAKVAEFTATFEGQVQAFDRIIQKRSD-GDRVEER 223
89************************************9996568999***************************************9.7899*** PP
GLTSCR1 83 vmlerllleeeraeleelk 101
+m+e++ll++er+++ +l
VIMSS10092390 224 LMMEQVLLNDERNACIQLD 242
*************998875 PP
== domain 4 score: -1.7 bits; conditional E-value: 0.22
GLTSCR1 60 kllnkyrrlllreskrespseee 82
++ + r++ l +++ ++++ee+
VIMSS10092390 247 AQDARLRMAALAQAAGQARAEES 269
44444444444444444444442 PP
== domain 5 score: -2.3 bits; conditional E-value: 0.35
GLTSCR1 75 respseeevmlerllleeerael 97
++s++ee+ le +l++ee+++
VIMSS10092390 316 NNSQKEEKEPLEDFLNDEENENG 338
55666666666666666666554 PP
Or compare VIMSS10092390 to CDD or PaperBLAST