PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS10092731 to PF03478 (DUF295)

VIMSS10092731 has 427 amino acids

Query:       DUF295  [M=259]
Accession:   PF03478.22
Description: Domain of unknown function (DUF295)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    4.8e-12   32.1   0.1    9.1e-12   31.2   0.1    1.5  1  VIMSS10092731  


Domain annotation for each sequence (and alignments):
>> VIMSS10092731  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   31.2   0.1   9.1e-12   9.1e-12      12     188 ..     145     336 ..     133     384 .. 0.68

  Alignments for each domain:
  == domain 1  score: 31.2 bits;  conditional E-value: 9.1e-12
         DUF295  12 edsstlfslpdgklyr.rlklPegrrrcvgssggwLltaderssnlfllnpltgarieLPplstlp.ve..............ellirkvvlsasp 91 
                    +d++++++l   k yr ++       ++vgss+g +++   + + +fl np+tg+  +LP++ + + ve                           
  VIMSS10092731 145 DDRRVMLKLNA-KSYRrNW------VEIVGSSNGLVCISPGE-GAVFLYNPTTGDSKRLPENFRPKsVEyerdnfqtygfgfdG-----------L 221
                    56667777744.5565233......459*********98875.89***************885433333666654333222220...........2 PP

         DUF295  92 ssdyv..vvlisgesggklafcrsgdssWttieee.....gegyedvvfhkgkfYaltntg.....evvvldlgsdeplevs..evvks.....ke 168
                    ++dy    +++  e+    +++  + +sW++i++        +y + v+++g ++ + +++      vv++d+ ++e +e+       +     ++
  VIMSS10092731 222 TDDYKlvKLVATSEDILDASVYSLKADSWRRICNLnyehnDGSYTSGVHFNGAIHWVFTESrhnqrVVVAFDIQTEEFREMPvpD---EaedcsHR 314
                    3444300333333335566777788999****988999*95589*********99765444456558888888666666665541...23445433 PP

         DUF295 169 .rkylVes.sGelllVrrylkk 188
                      + +V s +G+l++V++  ++
  VIMSS10092731 315 fSNFVVGSlNGRLCVVNSCYDV 336
                    67899999********986665 PP



Or compare VIMSS10092731 to CDD or PaperBLAST