VIMSS10093007 has 685 amino acids
Query: DUF740 [M=624]
Accession: PF05340.16
Description: Protein of unknown function (DUF740)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.2e-210 687.4 33.8 1.8e-128 415.9 5.0 3.2 2 VIMSS10093007
Domain annotation for each sequence (and alignments):
>> VIMSS10093007
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 415.9 5.0 1.8e-128 1.8e-128 1 326 [. 18 347 .. 18 349 .. 0.86
2 ! 275.9 20.9 4.4e-86 4.4e-86 314 624 .] 349 654 .. 347 654 .. 0.83
Alignments for each domain:
== domain 1 score: 415.9 bits; conditional E-value: 1.8e-128
DUF740 1 PpqppqrrrsstsCdrHPdEeftGfCpaCLcERLagLdasaaaasssssrkp.staaaalkalfkkpsasse.....lsksksakssffPeLRRtk 90
Ppqppq++r stsC+rHP+E+ftGfCp+CLcERL++Ld++++ sssss+kp +++aaalkalfk ps ++ ++ ++++k+ ffPeLRRtk
VIMSS10093007 18 PPQPPQPHRLSTSCNRHPEERFTGFCPSCLCERLSVLDQTNNGGSSSSSKKPpTISAAALKALFK-PSGNNGvggvnTNGNGRVKPGFFPELRRTK 112
9******************************************999999999899**********.6666656777789999************** PP
DUF740 91 sfsaskn.eglssvfEPqRksCDvRvrntLwsLFsqDdeervetkvekltassneaeeeiskssvkepvleekeeeeeeeeeeeleee........ 177
sfsaskn eg+s+vfEPqR+sCDvR r++Lw+LFsqD++++ ++ e + e++kssv epvle ++e e+e+++eeleee
VIMSS10093007 113 SFSASKNnEGFSGVFEPQRRSCDVRLRSSLWNLFSQDEQRNL-----PSNVTGGEIDVEPRKSSVAEPVLEVNDEGEAESDDEELEEEeeedyvea 203
******989****************************85555.....45566777778899**********9977777777776666633343333 PP
DUF740 178 ..lndnvieeivEee......eeseevvveeeaveeeelaeeneedeelktmkdhiDldsqqkkaskgrDlkeiagsFwsAasvFskklqkWrrkq 265
ei++++ + e v+v+ e++ee+++ + ++eelk++kd+iDldsq+kk+s++r sFwsAasvFskklqkWr+ q
VIMSS10093007 204 gdF------EILNDSgelmreKSDEIVEVR-EEIEEAVKPTKGLSEEELKPIKDYIDLDSQTKKPSVRR-------SFWSAASVFSKKLQKWRQNQ 285
330......455555556642233344444.4455666567888999*******************777.......******************** PP
DUF740 266 klkkrange.kaagsatlpvekpigrklrdtqseiadyafGRRsCDtdPRFslDagRislDd 326
k+kkr+ng+ +++gsa+lpvekpigr+lrdtqseiady+ GRRsCDtdPRFslDagR+slD
VIMSS10093007 286 KMKKRRNGGdHRPGSARLPVEKPIGRQLRDTQSEIADYGYGRRSCDTDPRFSLDAGRFSLDA 347
****999988**************************************************96 PP
== domain 2 score: 275.9 bits; conditional E-value: 4.4e-86
DUF740 314 RFslDagRislDdprysfdePRAswDgyliGarti.......prlppmlsvvEdap...vdvversDgqipvee...........ainedes..vp 386
RFs+D+gRislDdprysfdePRAswDg liG rt+ p+ p+mlsvvEdap +v+r+D+q pvee + d +p
VIMSS10093007 349 RFSVDIGRISLDDPRYSFDEPRASWDGSLIG-RTMfppaaraPPPPSMLSVVEDAPppvHRHVTRADMQFPVEEpappppvvnqtNGVSD-PviIP 442
9******************************.55558777777999*********99977899****************98776422333.2579* PP
DUF740 387 GGsaqtrdyysDsssrRrksldRsssi.rktaaavvaevdelkavsnakvspatadylhgaklvlderdldfssnslrdDi...setaelegfrdn 478
GGs+qtrdyy+DsssrRrksldRsss rktaaavva++de k + s +d s+slrd+ +eta++ +fr++
VIMSS10093007 443 GGSIQTRDYYTDSSSRRRKSLDRSSSSmRKTAAAVVADMDEPKLSVSSAIS------------------IDAYSGSLRDNNnyaVETADNGSFREP 520
***********************98877*************9654432222..................235689999988778899999999999 PP
DUF740 479 aivignGerk.....gakksrrwrkawsiwGfihrrasgnk.....deeedrysrsng..versfsesWpelR..gkgglnpkllRsnssvsaRns 560
a+ G+rk ++kksrrw +wsi+G+i+r+ s+nk +eeedry r ng vers+sesWpelR g gg +p++ Rsns+vs+R+
VIMSS10093007 521 AM--MIGDRKvnsndNNKKSRRWG-KWSILGLIYRK-SVNKyeeeeEEEEDRYRRLNGgmVERSLSESWPELRngGGGGGGPRMVRSNSNVSWRS- 611
98..5566776677799******6.9**********.888722221345688988775448************7558999***************. PP
DUF740 561 vssnsgiggsfgsaRkssvetngsgkkkrdefvLERnrsaryspneidnGlLrFyltPlrssrr 624
s + gsaRk++ g Rn+s+rysp++ +nG+L+Fyl +++srr
VIMSS10093007 612 -S-------GGGSARKVN----G--L-------DRRNKSSRYSPKNGENGMLKFYLPHMKASRR 654
.4.......236889876....4..2.......349**************************97 PP
Or compare VIMSS10093007 to CDD or PaperBLAST