VIMSS10095099 has 477 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.1e-16 47.2 0.0 1.2e-15 43.8 0.0 2.1 1 VIMSS10095099
Domain annotation for each sequence (and alignments):
>> VIMSS10095099
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 43.8 0.0 1.2e-15 1.2e-15 3 140 .. 193 314 .. 192 321 .. 0.90
Alignments for each domain:
== domain 1 score: 43.8 bits; conditional E-value: 1.2e-15
UPF0020 3 yRvfngpapLketLAaalvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgar..... 93
R + gp+++ +++A + + a+++ g+ +DP+ G+G+il+ aa ga + g+D+d rvv+ +r
VIMSS10095099 193 SRTYLGPTAMDAEMAFLMANQAKATSGKLVYDPFVGTGSILVSAARFGAMTM--------------------------GADIDIRVVRDGRgpdcn 262
5999*********************************************999..........................**********99866666 PP
UPF0020 94 ..eNaekagvgdliefsqadaakLr...lkegevdvivtnpPYGerlgskka 140
+N +++g+ +++ +d+ + ++ +d+i+++pPYG r g k+
VIMSS10095099 263 vwSNFKQYGLPMPVALLRMDNNVPPwrsGLKEIFDAIICDPPYGVRAGGRKS 314
667****************99854477755568*************997765 PP
Or compare VIMSS10095099 to CDD or PaperBLAST