VIMSS10098509 has 1928 amino acids
Query: DUF4704 [M=486]
Accession: PF15787.9
Description: Neurobeachin/BDCP, DUF4704 alpha solenoid region
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.4e-52 163.4 0.1 3e-39 121.1 0.0 2.1 2 VIMSS10098509
Domain annotation for each sequence (and alignments):
>> VIMSS10098509
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 121.1 0.0 3e-39 3e-39 33 257 .. 321 550 .. 318 552 .. 0.93
2 ! 40.2 0.0 1.1e-14 1.1e-14 343 483 .. 708 847 .. 650 850 .. 0.82
Alignments for each domain:
== domain 1 score: 121.1 bits; conditional E-value: 3e-39
DUF4704 33 iqvLfPLfsqldqaeedeqlege...seadeklcatlleliaelleesetnqqqllrlkGflvls....flLqsvspkhLtlevlsalksllkvlk 121
+++L+PL ++ ++++ e+ + + s ++++l+a ++++i+ +++ ++ n+++l r++G+++l+ +lL s+ + +++ + + ++l+++++
VIMSS10098509 321 PMSLLPLTVSSVHKDNLEPCSRNvpsSLTTYSLAAPIFRMISFAIK-HPGNNEELSRTRGPEILAtvlgYLLHSLASFDIKHDRVG-DEELVAAIV 414
689***************999989999******************9.**************99887777************99986.677777777 PP
DUF4704 122 sl..an..selLlkdlvdsillnpklWiytdyeVQkeLysyLatdfvsdkkiltnlrrvstVlrlldilkqfYwvenaksksgvtskslleeRpsq 213
sl ++ +++L ++l+ +ll++k+W ++y +Qk+L+s+L ++++++ t +r++ +++ lld +++++w ++k++v ++sl+++ ++
VIMSS10098509 415 SLcqSQkiNHALKVQLFCTLLLDLKIWSVCSYRLQKKLLSSLQDMVFTEA---TAMRNADAIQVLLDGCRRYFWTI--QEKDSVNTFSLDGDARQV 505
77565589*****************************************7...99*******************96..8***************** PP
DUF4704 214 eeilklrallLslieqlvrks.seisesevkalinyletvqdden 257
e+++l++ lL++ie l+ + + ++++++ l+ ++ ++ + ++
VIMSS10098509 506 GEVNALVDELLVIIELLMGAAsPSFAADDLHRLLGFIIESPQPNQ 550
******************98736899***********99998876 PP
== domain 2 score: 40.2 bits; conditional E-value: 1.1e-14
DUF4704 343 eltdktynvLfevllekaspkivlekhsepekssklelPqilkviakllsqskdsesielrkkiLsdllvLlksnrenrrallqmsvWqewLvala 438
+td++y +L ++++ s++ + + + ++e+Pq+l ++++ l+ +++ l+++ L+d+l L + +e r +l +m++W ew+++++
VIMSS10098509 708 LMTDNVYTTLLGASVNASSTE---DGLNFCDLGHRFEHPQLLLILLRSLPFASK----ALQNRALQDILFLACTHPEKRSSLTKMEEWPEWILEIL 796
445555555555444444433...33344455589***************9999....478999******************************98 PP
DUF4704 439 klaeikeee.......eseikelvielfkvLlvhalktekgGwrvlvdtlai 483
++ k++ ++e+++l+ + + ++l h++ k+Gw++++ t+ +
VIMSS10098509 797 ISNYEKDAGkqsaspgSAEEEDLIHNFLIIMLEHSM-RQKDGWKDIEATIHC 847
877776666689999779******************.889*******99977 PP
Or compare VIMSS10098509 to CDD or PaperBLAST