VIMSS10098866 has 345 amino acids
Query: GeBP-like_DBD [M=94]
Accession: PF04504.20
Description: Glabrous-enhancer-binding protein-like family, DBD domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.1e-30 90.7 1.1 4.1e-30 90.7 1.1 2.0 2 VIMSS10098866
Domain annotation for each sequence (and alignments):
>> VIMSS10098866
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 90.7 1.1 4.1e-30 4.1e-30 2 94 .] 141 228 .. 140 228 .. 0.97
2 ? -3.3 0.3 0.84 0.84 62 70 .. 300 308 .. 295 324 .. 0.43
Alignments for each domain:
== domain 1 score: 90.7 bits; conditional E-value: 4.1e-30
GeBP-like_DBD 2 qrlWseeDEieiLqglldfksktgkspkddldafyeavkkslsfdvskeqlveKirrLkkkyenkakkakgkepsfskphdqklfelskkIWg 94
qr+WseeDEi++Lq+++dfk++tg+sp d+ d f++ +kks+sfdvsk q+ +Kir+ k+ky ++k +s +++hd+k+ l+ + Wg
VIMSS10098866 141 QRVWSEEDEISLLQAMIDFKAETGTSPWDHKDRFFDIAKKSISFDVSKVQFFDKIRSFKRKYFG-----DRKVRSVESDHDKKCLGLAVSFWG 228
9**************************************************************8.....55789******************8 PP
== domain 2 score: -3.3 bits; conditional E-value: 0.84
GeBP-like_DBD 62 kyenkakka 70
k+++ + +
VIMSS10098866 300 KWSKVSVET 308
333322222 PP
Or compare VIMSS10098866 to CDD or PaperBLAST