VIMSS10100824 has 359 amino acids
Query: GDT1 [M=75]
Accession: PF01169.24
Description: Divalent cation/proton antiporter GDT1
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.8e-44 135.7 22.1 6.8e-27 80.0 7.7 2.4 2 VIMSS10100824
Domain annotation for each sequence (and alignments):
>> VIMSS10100824
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 61.5 6.5 4.1e-21 4.1e-21 2 75 .] 148 226 .. 147 226 .. 0.88
2 ! 80.0 7.7 6.8e-27 6.8e-27 1 75 [] 277 351 .. 277 351 .. 0.98
Alignments for each domain:
== domain 1 score: 61.5 bits; conditional E-value: 4.1e-21
GDT1 2 tsflliflaElGDkTqlatiaLAarykplaVflGatlAlalatllavllGsllakrlperlv......klvaallFlvfG 75
++f+lif++E+GDkT++++++LA++y+ V+lG++ Al l+t+l+v++G+ + + +p+++ +++a +l+++fG
VIMSS10100824 148 AAFSLIFVSEIGDKTFFIAALLAMQYEKTLVLLGSMGALSLMTILSVVIGKIF-QSVPAQFQttlpigEYAAIALLMFFG 226
79************************99**********************999.78888776455666777777777776 PP
== domain 2 score: 80.0 bits; conditional E-value: 6.8e-27
GDT1 1 ltsflliflaElGDkTqlatiaLAarykplaVflGatlAlalatllavllGsllakrlperlvklvaallFlvfG 75
++sf+l+f+aE+GD+++lat+aL+a ++pl+V Ga++++++at+la+++G++la++++e+lv +v+++lFlvf+
VIMSS10100824 277 WKSFSLVFFAEWGDRSMLATVALGAAQSPLGVASGAIAGHLVATVLAIMGGAFLANYISEKLVGYVGGALFLVFA 351
579***********************************************************************7 PP
Or compare VIMSS10100824 to CDD or PaperBLAST