VIMSS10106001 has 288 amino acids
Query: DUF92 [M=251]
Accession: PF01940.21
Description: Integral membrane protein DUF92
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.1e-85 273.1 8.7 1.3e-85 272.8 8.7 1.0 1 VIMSS10106001
Domain annotation for each sequence (and alignments):
>> VIMSS10106001
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 272.8 8.7 1.3e-85 1.3e-85 2 250 .. 15 276 .. 14 277 .. 0.90
Alignments for each domain:
== domain 1 score: 272.8 bits; conditional E-value: 1.3e-85
DUF92 2 lalllaalayrkksltlsGalaavlvgvlillaplglaffllllvFfllgsllTkvkkeeKakaklaeekegaRgavqVlanglvalllallyall 97
++ l+a+++y++ksl+lsG +a++lv+++++ a g+++++lllvFfl++s+lTkv++++K++ +++ +++g+R++vqVl+n+++a++l++++ +l
VIMSS10106001 15 ISSLIAFRSYKRKSLDLSGGIAGFLVMTIHFTA--GFRYGALLLVFFLTSSKLTKVGEDKKRRVDVEFKEGGQRNWVQVLCNSGIASVLVVIACTL 108
6789***************************99..555******************************************************7555 PP
DUF92 98 el.......skella...lssllllgfvaslaaalaDTlaSElGkllskkprlittlkkvppGtnGgVsllGtlagllGalliallalllll..la 181
+ s + ++l+ g+++++a++++DT++SElG+l+ +prlitt+k+v++GtnGgV+ G+la+l+++++++l+ l+++l
VIMSS10106001 109 TGwkdkcldS----KqseIVTALIGGIIGHYACCNGDTWSSELGVLSDAQPRLITTFKPVKKGTNGGVTKAGLLAALAAGTTVGLTFLIFGLftA- 199
5585544431....1344668999********************77777***********************************99444444541. PP
DUF92 182 k........qlklillvtlaGllGsllDSllGAtlqasvvdketgkvvekkvkesrkisGldlldNnaVNllstllg 250
+ ql +i l +laGl+Gsl+DS+lGAt+q s++++ ++kvv k++ +++kisG+d+ldNn+VN++s ll+
VIMSS10106001 200 ScasdvalkQLLVIPLSALAGLCGSLIDSILGATIQFSGFCSVRNKVVGKPGPTVKKISGVDILDNNGVNFVSILLT 276
145677888999999***********************************************************997 PP
Or compare VIMSS10106001 to CDD or PaperBLAST