VIMSS10107693 has 347 amino acids
Query: PGG [M=116]
Accession: PF13962.10
Description: Domain of unknown function
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.9e-33 100.0 7.4 3.9e-33 100.0 7.4 1.6 2 VIMSS10107693
Domain annotation for each sequence (and alignments):
>> VIMSS10107693
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 100.0 7.4 3.9e-33 3.9e-33 1 114 [. 174 291 .. 174 293 .. 0.92
2 ? -3.0 0.3 0.33 0.33 65 72 .. 311 318 .. 300 334 .. 0.48
Alignments for each domain:
== domain 1 score: 100.0 bits; conditional E-value: 3.9e-33
PGG 1 eeklkearntlllvAtLiatvtFaAgftlPGGywqddskssaGkpilakkkafkvFvvsnaiAlvaSlvavvlll.issl...vedeakslkkklr 92
e+++ke++++++lv+tLiatv FaA+ftlPGG+ ++ + ++ G p+++k+ f+vF++s+++Al++S+++++++l i ++ ++++++ l++kl+
VIMSS10107693 174 EKWMKETATACILVSTLIATVVFAAAFTLPGGNDTSGDIKTLGFPTFRKEFWFEVFIISDSVALLSSVTSIMIFLsILTSryaEASFQTTLPTKLM 269
58*******************************77765479**********************************54455689999********** PP
PGG 93 vllvllvlallsllvAFaagly 114
++l++l+++++s+++AF+a+l+
VIMSS10107693 270 LGLLALFVSIISMVLAFTATLI 291
******************9986 PP
== domain 2 score: -3.0 bits; conditional E-value: 0.33
PGG 65 vaSlvavv 72
+++l+ vv
VIMSS10107693 311 ATALSFVV 318
22222222 PP
Or compare VIMSS10107693 to CDD or PaperBLAST