VIMSS10109458 has 535 amino acids
Query: PGG [M=116]
Accession: PF13962.10
Description: Domain of unknown function
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.7e-36 109.1 6.3 5.7e-36 109.1 6.3 2.0 2 VIMSS10109458
Domain annotation for each sequence (and alignments):
>> VIMSS10109458
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 109.1 6.3 5.7e-36 5.7e-36 2 115 .. 358 467 .. 357 468 .. 0.95
2 ? -2.7 0.1 0.28 0.28 95 111 .. 480 496 .. 474 520 .. 0.67
Alignments for each domain:
== domain 1 score: 109.1 bits; conditional E-value: 5.7e-36
PGG 2 eklkearntlllvAtLiatvtFaAgftlPGGywqddskssaGkpilakkkafkvFvvsnaiAlvaSlvavvlllisslvedeakslkkklrvllvl 97
e l++arnt+++vA+Lia+vtF++g+++PGG++qd + Gk+++ + afkvF vsn+iAl++Sl++v+lll s++ ++kslk++l++++++
VIMSS10109458 358 EALQNARNTITVVAVLIASVTFTCGLNPPGGVYQDG--HFIGKATAGGTVAFKVFSVSNSIALFTSLCIVILLL--SIIPFRTKSLKTFLIITHKM 449
6899****************************9997..67******9999************************..4568899************* PP
PGG 98 lvlallsllvAFaaglyl 115
++la+++++ A++ag+++
VIMSS10109458 450 IWLAVIAMASAYVAGTCV 467
****************97 PP
== domain 2 score: -2.7 bits; conditional E-value: 0.28
PGG 95 lvllvlallsllvAFaa 111
++lv+a+++l + F++
VIMSS10109458 480 KATLVIACVMLGGMFIF 496
55566666666555554 PP
Or compare VIMSS10109458 to CDD or PaperBLAST