VIMSS10109989 has 598 amino acids
Query: PGG [M=116]
Accession: PF13962.10
Description: Domain of unknown function
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.5e-33 101.3 6.8 1.5e-33 101.3 6.8 1.8 2 VIMSS10109989
Domain annotation for each sequence (and alignments):
>> VIMSS10109989
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 101.3 6.8 1.5e-33 1.5e-33 2 115 .. 418 527 .. 417 528 .. 0.94
2 ? -3.5 0.2 0.49 0.49 94 106 .. 549 561 .. 538 570 .. 0.50
Alignments for each domain:
== domain 1 score: 101.3 bits; conditional E-value: 1.5e-33
PGG 2 eklkearntlllvAtLiatvtFaAgftlPGGywqddskssaGkpilakkkafkvFvvsnaiAlvaSlvavvlllisslvedeakslkkklrvllvl 97
e l++arnt+++vA+Lia+v+F++g+++PGG++qd + Gk+++ + afk+F v+n iAl++Sl++v ll+ s+++ ++k+lk+++++++++
VIMSS10109989 418 ESLQNARNTITIVAVLIASVAFTCGINPPGGVHQDG--PFIGKATAGRTLAFKIFSVANNIALFTSLSIVTLLV--SIISYRTKALKMCVVIAHKM 509
6799****************************8886..77******8888************************..4568899************* PP
PGG 98 lvlallsllvAFaaglyl 115
++la++s+++A+aa++++
VIMSS10109989 510 MWLAVASMATAYAASAWI 527
***************987 PP
== domain 2 score: -3.5 bits; conditional E-value: 0.49
PGG 94 llvllvlallsll 106
+l ++++ + +++
VIMSS10109989 549 ALGSMFVYVSFMM 561
2223333333333 PP
Or compare VIMSS10109989 to CDD or PaperBLAST