PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS101165 to TIGR00001

VIMSS101165 has 65 amino acids

Query:       TIGR00001  [M=63]
Accession:   TIGR00001
Description: rpmI_bact: ribosomal protein bL35
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence    Description
    ------- ------ -----    ------- ------ -----   ---- --  --------    -----------
    8.8e-25   73.1   9.1    9.4e-25   73.0   9.1    1.0  1  VIMSS101165  


Domain annotation for each sequence (and alignments):
>> VIMSS101165  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   73.0   9.1   9.4e-25   9.4e-25       1      61 [.       2      62 ..       2      64 .. 0.98

  Alignments for each domain:
  == domain 1  score: 73.0 bits;  conditional E-value: 9.4e-25
    TIGR00001  1 pKmKTkkaaaKRFkvtgsGkikrkkagkrHlltkKsskrkRqLrkkalvsksdlkrvkllL 61
                 pK KT++a+aKRFk tgsG +kr +a+++H +  K++k++R+Lrk +lvs++d kr+k++ 
  VIMSS101165  2 PKQKTHRASAKRFKRTGSGGLKRFRAFTSHRFHGKTKKQRRHLRKAGLVSSGDFKRIKAMV 62
                 9*********************************************************995 PP



Or compare VIMSS101165 to CDD or PaperBLAST