VIMSS10321294 has 541 amino acids
Query: RACo_C_ter [M=261]
Accession: PF14574.11
Description: C-terminal domain of RACo the ASKHA domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.6e-69 218.4 2.9 2.2e-68 216.2 2.1 2.2 2 VIMSS10321294
Domain annotation for each sequence (and alignments):
>> VIMSS10321294
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -3.6 0.0 0.26 0.26 151 172 .. 64 85 .. 60 86 .. 0.80
2 ! 216.2 2.1 2.2e-68 2.2e-68 2 259 .. 170 426 .. 169 428 .. 0.94
Alignments for each domain:
== domain 1 score: -3.6 bits; conditional E-value: 0.26
RACo_C_ter 151 ietLleevglevedidkvylaG 172
++ ++e+++++ di+++ + G
VIMSS10321294 64 VKKIIERFDVDPADIQRIAICG 85
6778899999999999999988 PP
== domain 2 score: 216.2 bits; conditional E-value: 2.2e-68
RACo_C_ter 2 lslliDiGTNaEivlgnkdwllaasaaaGPAlEGgeikcGmrAapgAierveidpetlevelkvignek......................pkGic 75
sl++D+GTNaE++l+ d+++++saaaGPA+EG++i+cGm+A+pgAi++v+ + + +++++++++ +kGi+
VIMSS10321294 170 PSLVTDYGTNAEMALKIGDKIITGSAAAGPAIEGQGISCGMLASPGAISDVNPEGDY--WRITILDEDMsprkahlidpatgdikeasdliAKGIT 263
589************************************************766666..999999887778999********************** PP
RACo_C_ter 76 GsGiidliaelleagiidkkgklnkelkserireeeeteeyvlvlaeesetekdivitekDidelirakaAiyagietLleevglevedidkvyla 171
G+G+i++i+ +l++g+i+k +l + +++l++ + i ++Di+e+ +a++Ai+a++ tLl e+gl+++d+d +y+a
VIMSS10321294 264 GTGVIAAISVALDTGVITKLPNL-------------PNGKVILAD--------GVEIYDRDIEEAGKAIGAIRAAHLTLLVEAGLAYDDLDYMYMA 338
*******************9999.............345667754........699**************************************** PP
RACo_C_ter 172 GafGsyidiekAitiGllPdlelekvkqvGNtslagAraallsreareeleeiarki..tyielavekeFmdefvaalflphtdlelfps 259
Ga+G+yid+ekA +G +P+ ++++q+GNts++ Ar+++++ ++ee++e+a++i +++++a++k+F++ +v +l+++++++ ++++
VIMSS10321294 339 GATGAYIDAEKARILGSCPN-FSKSIVQFGNTSISLARELVFDGGRLEEVKEVANRIkaDHLMMAESKTFSNFYVCELSYWTQGM-PIET 426
********************.8899********************************999**********************999.6666 PP
Or compare VIMSS10321294 to CDD or PaperBLAST