VIMSS10342118 has 1253 amino acids
Query: Met_synt_B12 [M=273]
Accession: PF02965.22
Description: Vitamin B12 dependent methionine synthase, activation domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.3e-127 411.0 0.0 2e-127 410.3 0.0 1.3 1 VIMSS10342118
Domain annotation for each sequence (and alignments):
>> VIMSS10342118
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 410.3 0.0 2e-127 2e-127 2 273 .] 960 1235 .. 959 1235 .. 0.98
Alignments for each domain:
== domain 1 score: 410.3 bits; conditional E-value: 2e-127
Met_synt_B12 2 leelveyidWtpffqawelkgk.ypkiledekvgeeakklfkdAqamLkkiieekllkakavvglfpansvg.ddievyadesrseelatlhtL 93
l++lv++idW pff+awel+ k +p il+d++ geea+kl++dAqa+L+++++e++l+a+av+g+fpan vg ddi +y+de+r++ latlh L
VIMSS10342118 960 LDDLVRTIDWLPFFRAWELAHKhFPGILDDAVIGEEARKLYADAQAFLERLVSERWLQARAVLGFFPANGVGaDDIALYRDEARTQPLATLHNL 1053
899****************99879***********************************************77********************* PP
Met_synt_B12 94 rqqaeke..egepnlclaDfvapkesgvkDyiGlfavtaglgieelakefeaeeDdYsailvkalaDrLaeAfaellhekvrkelWgyakdekl 185
rqq+ ++ ++++n+cl+Df+ap+esg+ D+iG+favtag+giee++++fea++DdYsai++kalaDrLae+fae+lh+ vr+++Wgya+ e+l
VIMSS10342118 1054 RQQMPRDggRNQANFCLSDFIAPAESGRPDWIGAFAVTAGVGIEEHLARFEADHDDYSAIMLKALADRLAESFAERLHQLVRTRYWGYAAGETL 1147
****9997778899******************************************************************************** PP
Met_synt_B12 186 sneelikekYqGiRpApGYpacpdhsekktlfelldaeekigieLteslamtPaasvsGlyfahpeskyFavgkiekdqvedyakrkg 273
sn+eli+ekYqGiRpApGY+acpdh+ek l++ll+ +++ig++Lte++am+P+a+vsG+yfahpe++yF+vg+i++dqvedya+rkg
VIMSS10342118 1148 SNDELIAEKYQGIRPAPGYAACPDHTEKGILWSLLEPDQRIGLTLTENYAMWPTAAVSGWYFAHPEARYFGVGRIQRDQVEDYAQRKG 1235
**************************************************************************************97 PP
Or compare VIMSS10342118 to CDD or PaperBLAST