VIMSS10342689 has 735 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6.3e-47 145.9 0.0 5.6e-46 142.8 0.0 2.0 2 VIMSS10342689
Domain annotation for each sequence (and alignments):
>> VIMSS10342689
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 142.8 0.0 5.6e-46 5.6e-46 1 195 [. 164 378 .. 164 380 .. 0.92
2 ? 0.7 0.0 0.019 0.019 75 130 .. 576 635 .. 555 675 .. 0.69
Alignments for each domain:
== domain 1 score: 142.8 bits; conditional E-value: 5.6e-46
UPF0020 1 RgyRvfngpapLketLAaalvrlagw....kdgepllDPmCGsGtilIEaallganiapgllrefvye.............lkaeaeeear...ae 76
RgyR++ apLke+LAaal+ +agw +g llDPmCGsGt+ IE+al++a+iapgllre++++ l+aea+ + ++
VIMSS10342689 164 RGYRDAGSAAPLKENLAAALLLRAGWpeiaAEGGALLDPMCGSGTLIIEGALIAADIAPGLLRERFGFhgwtqhdepawqrLLAEARLRRTaglKR 259
9*************************5444579*********************************************988666666555544433 PP
UPF0020 77 lk.lygsDldrrvvqgareNaekagvgdliefsqadaakLr.lkegevdvivtnpPYGerlgskkalekLYseflrelkrvlrgggrlvlltaenk 170
l l+g D ++++++++ +e+ag+++l +f+ + + + +e++ ++++ npPYGerlg+ ++l +LY +++ lk+++ g + +++++++
VIMSS10342689 260 LGsLRGYDVNPNAIRTSLHHLERAGLAGLAHFERRELSDCHpGREDDEGLVIVNPPYGERLGADEDLTQLYARLGSVLKERFVG--WRAAVFTSSP 353
336**************************************87777899*********************************99..********** PP
UPF0020 171 alekaleeralrkvkeknvklglll 195
+l k l+ ra+r ++n++++++l
VIMSS10342689 354 ELGKSLGLRATRIHSLYNGPIECRL 378
**********************986 PP
== domain 2 score: 0.7 bits; conditional E-value: 0.019
UPF0020 75 aelklygsDldrrvvqgareNaekagvgdlie.fsqadaakLr.....lkegevdvivtnpP 130
++ +Dl r +++ a +N+e g+ + + + qad r + + +d+i +pP
VIMSS10342689 576 GAASTTTVDLSRTYLEWAGRNLELNGIRGPNHqLIQADCL--RwidsmAGQRRFDLIFLDPP 635
55668899******************99875414555544..33345556668999999998 PP
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