PaperBLAST – Find papers about a protein or its homologs

 

Align VIMSS10349662 to PF04430 (DUF498)

VIMSS10349662 has 123 amino acids

Query:       DUF498  [M=109]
Accession:   PF04430.19
Description: Protein of unknown function (DUF498/DUF598)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence      Description
    ------- ------ -----    ------- ------ -----   ---- --  --------      -----------
    1.9e-27   81.7   0.0    2.2e-27   81.5   0.0    1.0  1  VIMSS10349662  


Domain annotation for each sequence (and alignments):
>> VIMSS10349662  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   81.5   0.0   2.2e-27   2.2e-27       2     109 .]      16     123 .]      15     123 .] 0.93

  Alignments for each domain:
  == domain 1  score: 81.5 bits;  conditional E-value: 2.2e-27
                    EEEESSEEEETTEEESSEEEE-SSSEEE-HH.CS.TTCEECHHHHHHCT..T..SEEEEE-TTS-----HHHHHHHHCCTSEEEEE-HHHHHHHHH CS
         DUF498   2 dgygeggfrvngvkyegsllvlpgevfawes.ak.aedlteeslallellepkpellilGtGarlrklppelrealkergigvevmdtraAcrtyN 95 
                    ++y +g+f +n  +y+++l++++ +v++ ++  + ++ +++++l+l+  l ++pe++++GtG++++ +p e+++++ ++g  v++m ++ Ac+tyN
  VIMSS10349662  16 KEYVKGRFILNIGEYNHPLILSATQVLEYQDkIDdIQSIKKSHLDLI--LATNPEIILIGTGEKQLLPPLEIINQIAKAGKSVDFMASDTACKTYN 109
                    68999************************55455599999*******..7899******************************************* PP

                    HHHHHT--EEEEEE CS
         DUF498  96 vlasegrrvaaali 109
                    +l++e+r+v +++i
  VIMSS10349662 110 LLVNENRNVSCIII 123
                    *********99886 PP



Or compare VIMSS10349662 to CDD or PaperBLAST