VIMSS103504 has 363 amino acids
Query: PDH_N [M=154]
Accession: PF02153.21
Description: Prephenate dehydrogenase, nucleotide-binding domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
7.6e-37 112.4 0.1 1.1e-36 111.9 0.1 1.2 1 VIMSS103504
Domain annotation for each sequence (and alignments):
>> VIMSS103504
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 111.9 0.1 1.1e-36 1.1e-36 1 153 [. 16 171 .. 16 172 .. 0.96
Alignments for each domain:
== domain 1 score: 111.9 bits; conditional E-value: 1.1e-36
PDH_N 1 laralrrkgfkvtvigydideekakaalelglvdeatdd.ieavkeadivllavPvevilevlkelap.hlkedalitDvgsvKekvvkelekllk.g 95
la ++ + ++ +i yd+d+++ ++a+ +g++ e+ + ea+k+ad+++ a+Pv + + l el+ k+++++ D+gs+K+ + ++ ++llk +
VIMSS103504 16 LASNIKYHNPNTNIIAYDADTSQLDKAKSIGIINEKCLNySEAIKKADVIIYATPVAITNKYLSELIDmPTKPGVIVSDTGSTKAMIQQHESNLLKhN 113
588999***************************98877769*************************9967899************************* PP
PDH_N 96 ksfvgghPmaGteksGvdaareelfenavviLtPtektdkealelvkelleevgarvi 153
++v+ghPmaG++ksGv +a+++lfena +iL +e +++a + +kell ++ a++i
VIMSS103504 114 IHLVSGHPMAGSHKSGVLNAKKHLFENAYYILVYNEPRNEQAANTLKELLSPTLAKFI 171
*****************************************************99997 PP
Or compare VIMSS103504 to CDD or PaperBLAST