VIMSS104000 has 180 amino acids
Query: DUF402 [M=68]
Accession: PF04167.18
Description: Protein of unknown function (DUF402)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.8e-23 68.9 3.8 1.8e-23 68.9 3.8 1.7 2 VIMSS104000
Domain annotation for each sequence (and alignments):
>> VIMSS104000
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 68.9 3.8 1.8e-23 1.8e-23 2 68 .] 63 127 .. 62 127 .. 0.96
2 ? -3.2 0.2 0.56 0.56 48 54 .. 138 144 .. 138 151 .. 0.61
Alignments for each domain:
== domain 1 score: 68.9 bits; conditional E-value: 1.8e-23
-EEEEE-TT-SEEEEEEEETTTEEEEEEEEEES--EE..E.EEE-EEEEEEESEEE......-HHHH CS
DUF402 2 lalwllplgewynvtkfldedgrfkgwYvniatppergegtvkyiDldLDvvvypdgevevlDedEl 68
+a+++++ w+nv+++++e +++++Y+n+++p +e+++kyiD+dLD++vyp+g++++lDedE+
VIMSS104000 63 PAIVYFHSEYWFNVICMFRE--DGIYYYCNLSSPFVCDEEALKYIDYDLDIKVYPNGKYHLLDEDEY 127
7899****************..7***********99988***************************7 PP
== domain 2 score: -3.2 bits; conditional E-value: 0.56
EEEEEES CS
DUF402 48 ldLDvvv 54
+d+D++
VIMSS104000 138 HDIDIIL 144
6899984 PP
Or compare VIMSS104000 to CDD or PaperBLAST