VIMSS10432738 has 616 amino acids
Query: TIGR00110 [M=543]
Accession: TIGR00110
Description: ilvD: dihydroxy-acid dehydratase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.1e-264 864.9 2.1 1.3e-264 864.7 2.1 1.0 1 VIMSS10432738
Domain annotation for each sequence (and alignments):
>> VIMSS10432738
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 864.7 2.1 1.3e-264 1.3e-264 2 542 .. 18 610 .. 17 611 .. 0.99
Alignments for each domain:
== domain 1 score: 864.7 bits; conditional E-value: 1.3e-264
TIGR00110 2 arallkatGlkdedlekPiiavvnsyteivPghvhlkdlaklvkeeieaaGgvakefntiavsDGiamgheGmkysLpsreiiaDsvetvvkahal 97
aral++atG++d+d++kPiiavvns+t++vPghvhl+dl+klv+eeiea+Ggvakefntiav+DGiamgh+Gm+ysLpsre+iaDsve++v+ah++
VIMSS10432738 18 ARALWRATGMTDDDFGKPIIAVVNSFTQFVPGHVHLRDLGKLVAEEIEASGGVAKEFNTIAVDDGIAMGHGGMLYSLPSRELIADSVEYMVNAHCA 113
79********************************************************************************************** PP
TIGR00110 98 DalvvissCDkivPGmlmaalrlniPaivvsGGpmeagktklsekidlvdvfeavgeyaagklseeeleeiersacPtagsCsGlftansmaclte 193
Da+v+is+CDki+PGmlma+lrlniP+i+vsGGpmeagktkls++i+++d+++a+++ a++++s++++++iersacPt+gsCsG+ftansm+clte
VIMSS10432738 114 DAMVCISNCDKITPGMLMASLRLNIPVIFVSGGPMEAGKTKLSDQIIKLDLVDAMIQGANPNVSDADSDQIERSACPTCGSCSGMFTANSMNCLTE 209
************************************************************************************************ PP
TIGR00110 194 alGlslPgsstllatsaekkelakksgkrivelvkknik.......PrdiltkeafenaitldlalGGstntvLhllaiakeagvklslddfdrls 282
alGls+Pg+++llat+a+++el+ ++g+riv l k++++ Pr+i++k+afena+tld+a+GGstntvLhlla+a+e +++++++d+drls
VIMSS10432738 210 ALGLSQPGNGSLLATHADRRELFLNAGRRIVGLAKRYYEqdddsvlPRSIASKAAFENAMTLDIAMGGSTNTVLHLLAAAQEGEIDFDISDIDRLS 305
************************************************************************************************ PP
TIGR00110 283 rkvPllaklkPsgkkv.iedlhraGGvsavlkeldkegllhkdaltvtGktlaetlekvkvlr................................. 344
r+vP+l+k++Ps++k+ +ed+hraGGv ++l+eld++gl+++ + +v+G +l etl++++++
VIMSS10432738 306 RQVPHLCKVAPSTQKYhMEDVHRAGGVLGILGELDRAGLMDNRVRNVLGLSLRETLDRYDIMLtqdeavkkmfragpagirttqafsqdtrwetld 401
***************99*********************************************99******************************77 PP
TIGR00110 345 ..vdqdvirsldnpvkkegglavLkGnlaeeGavvkiagveedilkfeGpakvfeseeealeailggkvkeGdvvviryeGPkGgPGmremLaPts 438
+q +irs + +++++gglavL+Gnlae+G++vk+agv+e l+f Gpakv+es+++a++ailggkv +GdvvviryeGPkGgPGm+emL+Pt+
VIMSS10432738 402 ddRQQGCIRSREFAFSQDGGLAVLYGNLAENGCIVKTAGVDEGSLVFSGPAKVYESQDDAVAAILGGKVVAGDVVVIRYEGPKGGPGMQEMLYPTT 497
665666****************************************************************************************** PP
TIGR00110 439 alvglGLgkkvaLitDGrfsGgtrGlsiGhvsPeaaegGaialvedGDkikiDienrkldlevseeelaerrakakkkea.........revkgaL 525
+l+++GLgk++aLitDGrfsGgt+GlsiGh sPeaa+gG+ialv+dGD+i+iDi++r ++l+v e+ela+rr + +++++ r+v++aL
VIMSS10432738 498 YLKSMGLGKACALITDGRFSGGTSGLSIGHASPEAASGGTIALVKDGDIINIDIPQRGIQLDVAENELAARRLEEDARGEaaytphgreRQVSFAL 593
******************************************************************************9999************** PP
TIGR00110 526 akyaklvssadkGavld 542
++ya l++sadkGav+d
VIMSS10432738 594 RAYATLATSADKGAVRD 610
***************98 PP
Or compare VIMSS10432738 to CDD or PaperBLAST