VIMSS10437209 has 343 amino acids
Query: LpxR [M=322]
Accession: PF09982.13
Description: Outer membrane protein LpxR
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.9e-95 304.2 0.4 5.5e-95 304.0 0.4 1.0 1 VIMSS10437209
Domain annotation for each sequence (and alignments):
>> VIMSS10437209
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 304.0 0.4 5.5e-95 5.5e-95 19 322 .] 47 343 .] 7 343 .] 0.96
Alignments for each domain:
== domain 1 score: 304.0 bits; conditional E-value: 5.5e-95
LpxR 19 ekstlslqleNDlfagegsDryYTnGlrlswlsaeeekkwlrelarllkplsksaesekrlglslgQkiyTPsdieaedpdpdDrPYAGylylelg 114
+ks +++ +eND++ + + Dr YT+G++++++s+e ++wl +l+ + + + +r++++++Q +yTP ++++p p+ +PYAGyl l++
VIMSS10437209 47 HKSFFTIITENDAYLNAHVDRFYTAGTNFNYTSKEYLNSWLGYLSYDF-----RSPKASRWQIAINQDLYTPI-SRKANPGPKTHPYAGYLSLNFL 136
678899*********9989**************************999.....688999*************6.6788999*************** PP
LpxR 115 lqsetkdeldslelslGvvGpaslaeqvQklvHkligseepkGWdnQlknepavnlsyerekrllekeadsgleldliphagaalGnvkteasagl 210
++++++++++ l+l++GvvGp++l++q+Q l+H+l++++ + GW+ Qlkne+++nl+ye+ +r+ + +++ +++d++p +++alGn+kt a++g+
VIMSS10437209 137 ISQRRENSIEDLQLQIGVVGPDALGKQTQALIHHLTHNPIFYGWNRQLKNEFILNLTYEYIHRF-TLLDSRYFSIDVLPGLKVALGNAKTFAGFGG 231
****************************************************************.9****************************** PP
LpxR 211 tlRlGknLpkdfgsarirpgseafapskskfgwyvFagaegryvarditLdGntfrdspsvdkeplvadlelGvalaykrvrlsytlvfrtkefee 306
lR+G+nL++dfg +++++g ++p+++ f++yvF g++g+yv+r+i+++Gn+f + +++++e++++dle+G++++yk++r+sy ++ +k+f+
VIMSS10437209 232 RLRMGYNLKSDFGVEKVNTGFLGSKPYNDAFSFYVFGGVSGSYVIRNIFIQGNSFGPPTDLSLEHFIYDLEFGASIMYKGFRFSYVITRLSKQFQA 327
*******************99999************************************************************************ PP
LpxR 307 qeeadqfGslslsvkf 322
q++a++fGs+ ls++f
VIMSS10437209 328 QRGAHSFGSIVLSFAF 343
*************987 PP
Or compare VIMSS10437209 to CDD or PaperBLAST