VIMSS107606 has 863 amino acids
Query: DUF1854 [M=130]
Accession: PF08909.15
Description: Domain of unknown function (DUF1854)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2e-41 127.1 2.3 2e-40 123.9 0.2 2.8 3 VIMSS107606
Domain annotation for each sequence (and alignments):
>> VIMSS107606
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 1.9 0.1 0.01 0.01 87 120 .. 23 56 .. 4 65 .. 0.82
2 ? -2.9 0.0 0.31 0.31 61 123 .. 563 623 .. 560 629 .. 0.71
3 ! 123.9 0.2 2e-40 2e-40 1 129 [. 736 861 .. 736 862 .. 0.98
Alignments for each domain:
== domain 1 score: 1.9 bits; conditional E-value: 0.01
DUF1854 87 lkgeedirrlsskrllitDsdgnryeipdlkaLd 120
l+ +e++ ++++++l+ D d ++i+++ +L+
VIMSS107606 23 LNLKEELVQIDGNKILVFDGDKEIFRIENVIKLS 56
4457788899999****************99987 PP
== domain 2 score: -2.9 bits; conditional E-value: 0.31
DUF1854 61 rilsvsekatpseweveTdrGettfvlkg.eedirrlsskrllitDsdgnryeipdlkaLdkks 123
+i ++++++ ++ + +T Ge+ +l+g ++ +rls r++i+ d + +++Ld +s
VIMSS107606 563 KIAKIHDEIVKLPFAYDTILGERGTYLSGgQR--QRLSIARAIIKNPDVLIFDE-ATSNLDVTS 623
78888999999999999999999999988443..46666667777666666654.566666666 PP
== domain 3 score: 123.9 bits; conditional E-value: 2e-40
DUF1854 1 yegvepvrafPisapdeyislvdadgkElaliedladLdeesrklleeeLarrefvpeIkrilsvsekatpseweveTdrGettfvlkgeedirrlss 98
y+ ++p+++fPi++p ++i+l+d++gkE++lied+++L+e+srk+le++La++++++ +k+i+ ++ k++++ew+veT+rG +++++ g++++ +l+s
VIMSS107606 736 YKALVPKMLFPITKP-TFIGLYDESGKEIFLIEDYTKLEENSRKVLENALAYNNLIFLVKKINGINIKGDQLEWDVETNRGLIKVYTIGRRNVVVLES 832
8899***********.********************************************************************************** PP
DUF1854 99 krllitDsdgnryeipdlkaLdkksrklLer 129
k ++++D+++n yei dl+++dkks klL +
VIMSS107606 833 K-VVLIDKNDNLYEI-DLDKIDKKSFKLLVE 861
9.9999*********.************965 PP
Or compare VIMSS107606 to CDD or PaperBLAST