VIMSS107701 has 558 amino acids
Query: TIGR00110 [M=543]
Accession: TIGR00110
Description: ilvD: dihydroxy-acid dehydratase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.2e-219 716.3 2.3 1.3e-219 716.1 2.3 1.0 1 VIMSS107701
Domain annotation for each sequence (and alignments):
>> VIMSS107701
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 716.1 2.3 1.3e-219 1.3e-219 1 542 [. 18 556 .. 18 557 .. 0.99
Alignments for each domain:
== domain 1 score: 716.1 bits; conditional E-value: 1.3e-219
TIGR00110 1 aarallkatGlkdedlekPiiavvnsyteivPghvhlkdlaklvkeeieaaGgvakefntiavsDGiamgheGmkysLpsreiiaDsvetvvkahalD 98
++ra+l+++Gl+de+++kP++a++ +++e P++ h la+++ke+ ++aG + f t+ v+D i mg eGm+ysL+sr++iaD ve+ +aha+D
VIMSS107701 18 PHRAFLRSVGLTDEEIGKPLVAIATAWSEAGPCNFHTLALARVAKEGTKEAGLSPLAFPTMVVNDNIGMGSEGMRYSLVSRDLIADMVEAQFNAHAFD 115
69************************************************************************************************ PP
TIGR00110 99 alvvissCDkivPGmlmaalrlniPaivvsGGpmeagktklsekidlvdvfeavgeyaagklseeeleeiersacPtagsCsGlftansmacltealG 196
+lv i+ CDk +PG+lma++rln+P+i ++GG+ e+g + ++++++ dv ea+g+y a++++e+el+eie+ a Pt g+CsGlftan+m +++ealG
VIMSS107701 116 GLVGIGGCDKTTPGILMAMARLNVPSIYIYGGSAEPGYFM-GKRLTIEDVHEAIGAYLAKRITENELYEIEKRAHPTLGTCSGLFTANTMGSMSEALG 212
*************************************999.9******************************************************** PP
TIGR00110 197 lslPgsstllatsaekkelakksgkrivelvkknikPrdiltkeafenaitldlalGGstntvLhllaiakeagvklslddfdrlsrkvPllaklkPs 294
++lPgs++ +ats+++ +k++gk + l+++ ik r+ilt eafenait +a+GGstn+vLhllaia eagvkl+lddf+r+s+++P +a++kP+
VIMSS107701 213 MALPGSASPTATSSRRVMYVKETGKALGSLIENGIKSREILTFEAFENAITTLMAMGGSTNAVLHLLAIAYEAGVKLTLDDFNRISKRTPYIASMKPG 310
************************************************************************************************** PP
TIGR00110 295 gkkviedlhraGGvsavlkeldkegllhkdaltvtGktlaetlekvkvlrv.dqdvirsldnpvkkegglavLkGnlaeeGavvkiagveedilkfeG 391
g++v++dl+++GGv+ vlk+l +gllh d+ltvtGkt++++le++k+ +v ++ ++r ++np+k gg+ +LkG+la+eGav+k+a+ + +kfeG
VIMSS107701 311 GDYVMADLDEVGGVPVVLKKLLDAGLLHGDVLTVTGKTMKQNLEQYKYPNVpHSHIVRDVKNPIKPRGGIVILKGSLAPEGAVIKVAATNV--VKFEG 406
***********************************************98762566********************************9876..***** PP
TIGR00110 392 pakvfeseeealeailggkvkeGdvvviryeGPkGgPGmremLaPtsalvglGLgkkvaLitDGrfsGgtrGlsiGhvsPeaaegGaialvedGDkik 489
+akv++se++a +++ +g+v+eG+vv+iryeGPkG+PGm+emL t+a++g+GL++ vaL+tDGrfsG+trG+++Ghv+Pea++gG+ia+vedGD+i
VIMSS107701 407 KAKVYNSEDDAFKGVQSGEVSEGEVVIIRYEGPKGAPGMPEMLRVTAAIMGAGLNN-VALVTDGRFSGATRGPMVGHVAPEAMVGGPIAIVEDGDTIV 503
******************************************************99.***************************************** PP
TIGR00110 490 iDienrkldlevseeelaerrakakkkearevkgaLakyaklvssadkGavld 542
iD+e+++ldl++seee+++r ++++++++r+++g+Lakya+lvs+a+ Gav++
VIMSS107701 504 IDVESERLDLKLSEEEIKNRLKRWSPPSPRYKSGLLAKYASLVSQASMGAVTR 556
***************************************************86 PP
Or compare VIMSS107701 to CDD or PaperBLAST