VIMSS1077693 has 920 amino acids
Query: Cas_Cas4 [M=161]
Accession: PF01930.21
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5e-11 29.1 0.0 4.5e-10 26.0 0.0 2.3 2 VIMSS1077693
Domain annotation for each sequence (and alignments):
>> VIMSS1077693
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -0.1 0.0 0.048 0.048 3 44 .. 686 727 .. 684 744 .. 0.74
2 ! 26.0 0.0 4.5e-10 4.5e-10 47 160 .. 792 914 .. 773 915 .. 0.83
Alignments for each domain:
== domain 1 score: -0.1 bits; conditional E-value: 0.048
Cas_Cas4 3 vkinyyliCkrklwlfsheitmeeeselvelGkliheesykr 44
++++y++ C+ ++ l + +e++ Gk +h+ ++
VIMSS1077693 686 SDVKYFFECPYQFKLRILYGFNAPLDEALGYGKSLHDALAEV 727
689**********99877555555557888899999865554 PP
== domain 2 score: 26.0 bits; conditional E-value: 4.5e-10
Cas_Cas4 47 kevei.se...sikiDvvk.kekeklvvvevKkskkieeaa..klQllyYlllLe.kkgieak.Gvleypkekkreevelteedreeleeaikeiee 134
e+ + ++ ++iD+v+ + +++++v++K+ ++ + +a + Ql Y+l + +g a+ +++ + ++++++ +++ + ++ +++ + +
VIMSS1077693 792 IEIALgDGvsvAGRIDLVRrMDTDEVTIVDLKSNDRAQAEAvtETQLHIYALGYKeLTGRPADyVEIYELDNQRQKRRSVDGDFTDDVRRDVLAAAT 888
4455533376799******666788899*****99887666689********999789999999999999999999999*********998888888 PP
Cas_Cas4 135 iissekppepkkkkiCkkCayaelCl 160
+++++ p+ kk C +C y +lC
VIMSS1077693 889 ALRRNQLPPKPGKKACGACDYCNLCS 914
88888999999999***********6 PP
Or compare VIMSS1077693 to CDD or PaperBLAST