VIMSS1099160 has 178 amino acids
Query: DUF308 [M=73]
Accession: PF03729.17
Description: Short repeat of unknown function (DUF308)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.2e-23 68.6 42.4 5.4e-18 51.4 13.6 3.1 3 VIMSS1099160
Domain annotation for each sequence (and alignments):
>> VIMSS1099160
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 51.4 13.6 5.4e-18 5.4e-18 2 72 .. 17 87 .. 16 88 .. 0.97
2 ! 16.3 10.5 4.8e-07 4.8e-07 21 72 .. 98 144 .. 90 145 .. 0.81
3 ! 24.3 10.2 1.5e-09 1.5e-09 2 45 .. 132 175 .. 131 178 .] 0.93
Alignments for each domain:
== domain 1 score: 51.4 bits; conditional E-value: 5.4e-18
DUF308 2 lGilliilGilaliwPgaallalviliGvlllvsGivqlvaafaarkkegggfwllllsGilyiiaGllll 72
G+l++ilG+l+l++Pg +++ +++++Gv++++ G++ +++ f+ +++ + ++ +ll+G+ly+i+G++++
VIMSS1099160 17 NGLLSLILGLLILFLPGQSAMGVTVMVGVVFIIIGLFDILSIFKEVDENTWVRLGHLLLGLLYLIVGIFVC 87
79******************************************************************986 PP
== domain 2 score: 16.3 bits; conditional E-value: 4.8e-07
DUF308 21 llalviliGvlllvsGivqlvaafaarkkegggfwllllsGilyiiaGllll 72
+l++ i++G+ +lv G+v+l +++++ + + ++s++l+i+aG++ll
VIMSS1099160 98 FLLVGIFVGITWLVEGFVEL-GTVQLAV--SK--GWTIFSAVLSIVAGIILL 144
67889***************.7883333..22..2799************98 PP
== domain 3 score: 24.3 bits; conditional E-value: 1.5e-09
DUF308 2 lGilliilGilaliwPgaallalviliGvlllvsGivqlvaafa 45
+++l+i++Gi++l+ P+ +++l +l+G++l+v Gi+++++++a
VIMSS1099160 132 SAVLSIVAGIILLMTPLYGAVMLWTLLGAILVVLGIFKVAHYLA 175
689**************************************985 PP
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