VIMSS1108871 has 451 amino acids
Query: DUF92 [M=251]
Accession: PF01940.21
Description: Integral membrane protein DUF92
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.1e-66 209.0 17.3 4.1e-66 209.0 17.3 2.5 2 VIMSS1108871
Domain annotation for each sequence (and alignments):
>> VIMSS1108871
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 1.0 4.6 0.012 0.012 25 121 .. 74 174 .. 67 181 .. 0.57
2 ! 209.0 17.3 4.1e-66 4.1e-66 2 251 .] 221 440 .. 220 440 .. 0.93
Alignments for each domain:
== domain 1 score: 1.0 bits; conditional E-value: 0.012
DUF92 25 vlvgvlillaplglaffllllvFfllgsllTkvkkeeKak...aklaeekegaRgavqVlanglvalllallyallel...skella.lssllllgf 114
++v v+ +++ + f+++l++F +++ k +e + ++l ++R++ ++++++al +a ++++ + +++l ++ ++++++
VIMSS1108871 74 LFVSVISGSFSYTYPFYIVLAAFAIAAVGNHKTSFSETDSvpdSSLRRRTIKKRSFSILWSSAFLALRIAAAFFAASWivyWQKLPVsYNLIFFIAV 170
5666666667777788999999988655544444444442222334444445699999999999998888886544435554444312333444444 PP
DUF92 115 vaslaaa 121
+++ +
VIMSS1108871 171 IGA---V 174
444...3 PP
== domain 2 score: 209.0 bits; conditional E-value: 4.1e-66
DUF92 2 lalllaalayrkksltlsGalaavlvgvlillaplglaffllllvFfllgsllTkvkkeeKakaklaeekegaRgavqVlanglvalllallyalle 98
++++l++layr+k++++s++l+a+l+gvli+++ gl+++llll+Ff+lg +Tk+k+++K++ ++a++k+g R++++V++n+++al+la++y ++
VIMSS1108871 221 FSFILGVLAYRAKIADVSALLSAALLGVLIIVF-SGLSWYLLLLTFFILGGGFTKYKYAYKESIGIAQAKDGIRSYENVFSNSTAALALAVAYGVFP 316
6899*****************************.899*******************************************************98433 PP
DUF92 99 lskellalssllllgfvaslaaalaDTlaSElGkllskkprlittlkkvppGtnGgVsllGtlagllGalliallallllllakqlklillvtlaGl 195
+++ +++++++++a+a++DTlaSE+G++ + +pr+ittl+ +pG++G+VsllG++a+++G+++i++la+ll+++++ + +l++t+ G+
VIMSS1108871 317 -EHS-----LPIIYAYMGTVATATGDTLASEIGTTAKGRPRMITTLRLSEPGVDGAVSLLGEFAAIFGSAVIGVLAYLLGISDNFILTVLITTAGGF 407
.222.....3378********************99988*************************************9****988778888888889** PP
DUF92 196 lGsllDSllGAtlqasvvdketgkvvekkvkesrkisGldlldNnaVNllstllga 251
+G+++DS+lGAtlq++ ++l+N++VNl++t++ga
VIMSS1108871 408 FGTNVDSFLGATLQKR-----------------------GVLSNSGVNLMATFAGA 440
****************.......................89999999999999875 PP
Or compare VIMSS1108871 to CDD or PaperBLAST