VIMSS11306 has 258 amino acids
Query: DUF92 [M=251]
Accession: PF01940.20
Description: Integral membrane protein DUF92
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.8e-69 218.9 12.7 4.8e-69 218.6 12.7 1.1 1 VIMSS11306
Domain annotation for each sequence (and alignments):
>> VIMSS11306
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 218.6 12.7 4.8e-69 4.8e-69 4 251 .] 28 245 .. 25 245 .. 0.94
Alignments for each domain:
== domain 1 score: 218.6 bits; conditional E-value: 4.8e-69
DUF92 4 lllaalayrkksltlsGalaavlvgvlillaplglaffllllvFfllgsllTkvkkeeKekaglaeekegaRdavqVlanglvalllallyalleskel 102
ll a+ kk+lt+ G+ +a+++gv+i++a lg++++l++l++f++gs++T+++++eKe+ag+ae+++g+R++++V++++l+a+l+al++a +
VIMSS11306 28 LLALAAIAPKKLLTPWGYGHAWVLGVIIWAA-LGWRGYLVVLAYFFVGSAVTRIGQKEKEAAGIAEKRSGQRGPENVWGSALTAALCALAIA------F 119
4556667789*********************.**********************************************************75......2 PP
DUF92 103 la.elssllllgfvaslaaalaDTlaSElGkllskkprlittlkkvppGtnGgVsllGtlagllGalliallallllllakqlklillvtlaGllGsll 200
+ ++ +l+lg+vas++++l+DT+aSE+Gk+++k+++littl++vp+Gt+G+Vs++Gtlag++++l++a+l++ ++l ++ +i++ tla++++++l
VIMSS11306 120 GPePWQLWLALGYVASFSTKLSDTTASEVGKAYGKNTFLITTLQPVPRGTEGAVSVEGTLAGFAAGLALAVLGYGVGLI--SFGGIIFSTLAAFIATNL 216
222456789***************************************************************9999965..589*************** PP
DUF92 201 DSllGAtlqasvvdketgkvvekkvkesrkisGldlldNeaVNllstllga 251
+S++GAtlq++ + +l+Ne+VN ++t+lga
VIMSS11306 217 ESVIGATLQNK----------------------WPWLTNEVVNGINTFLGA 245
***********......................**************9986 PP
Or compare VIMSS11306 to CDD or PaperBLAST