VIMSS114075 has 562 amino acids
Query: TIGR00110 [M=543]
Accession: TIGR00110
Description: ilvD: dihydroxy-acid dehydratase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.5e-240 784.1 3.3 4e-240 783.9 3.3 1.0 1 VIMSS114075
Domain annotation for each sequence (and alignments):
>> VIMSS114075
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 783.9 3.3 4e-240 4e-240 1 542 [. 14 556 .. 14 557 .. 0.99
Alignments for each domain:
== domain 1 score: 783.9 bits; conditional E-value: 4e-240
TIGR00110 1 aarallkatGlkd..edlekPiiavvnsyteivPghvhlkdlaklvkeeieaaGgvakefntiavsDGiamgheGmkysLpsreiiaDsvetvvkaha 96
+ar+ll+atG + d++kP++a++nsy++ivPghvhl++la+++ke+i++aG++++efnti+v+DGiamgh Gm+ysLpsreiiaD+ etv++ah+
VIMSS114075 14 PARSLLHATGALKspTDMNKPFVAICNSYIDIVPGHVHLRELADIAKEAIREAGAIPFEFNTIGVDDGIAMGHIGMRYSLPSREIIADAAETVINAHW 111
579*******866236********************************************************************************** PP
TIGR00110 97 lDalvvissCDkivPGmlmaalrlniPaivvsGGpmeagktklsekidlvdvfeavgeyaagklseeeleeiersacPtagsCsGlftansmacltea 194
+D++ i++CDki+PGm++aa+r+n+Pai+ sGGpm+ag + ++ ++l+++feavg+ ++g +s ee ++e++acPt+gsC+G+ftansm+cl+e+
VIMSS114075 112 FDGVFYIPNCDKITPGMILAAMRTNVPAIFCSGGPMKAGLSAHGKALTLSSMFEAVGAFKEGSISKEEFLDMEQNACPTCGSCAGMFTANSMNCLMEV 209
************************************************************************************************** PP
TIGR00110 195 lGlslPgsstllatsaekkelakksgkrivelvkknikPrdiltkeafenaitldlalGGstntvLhllaiakeagvklslddfdrlsrkvPllaklk 292
lGl+lP+++t+la+s +++e++++++ ++ve +k+++kPrdi+t+ea+++a++ld+a+GGstntvLh+laia+eag++++l++++ +++++P l+k++
VIMSS114075 210 LGLALPYNGTALAVSDQRREMIRQAAFKLVENIKNDLKPRDIVTREAIDDAFALDMAMGGSTNTVLHTLAIANEAGIDYDLERINAIAKRTPYLSKIA 307
************************************************************************************************** PP
TIGR00110 293 PsgkkviedlhraGGvsavlkeldk.egllhkdaltvtGktlaetlekvkvlrvdqdvirsldnpvkkegglavLkGnlaeeGavvkiagveedilkf 389
Ps+++ ++d+h+aGGv+a+++el k +g+lh d +tvtGktl e+ e +++ + dvi++ld p+ ++ggl +L+Gn+a++Gav+k++gv+ +i +f
VIMSS114075 308 PSSSYSMHDVHEAGGVPAIINELMKkDGTLHPDRITVTGKTLRENNEGKEIK--NFDVIHPLDAPYDAQGGLSILFGNIAPKGAVIKVGGVDPSIKTF 403
**********************987589*********************999..99****************************************** PP
TIGR00110 390 eGpakvfeseeealeailggkvkeGdvvviryeGPkGgPGmremLaPtsalvglGLgkkvaLitDGrfsGgtrGlsiGhvsPeaaegGaialvedGDk 487
+G+a f+s++ea+eai ++ v++G+vvviryeGPkGgPGm+emLaPts +vg GLgk+vaLitDGrfsG+trG+++Gh+sPeaa+gG+ial+edGD+
VIMSS114075 404 TGKAICFNSHDEAVEAIDNRTVRAGHVVVIRYEGPKGGPGMPEMLAPTSSIVGRGLGKDVALITDGRFSGATRGIAVGHISPEAASGGPIALIEDGDE 501
************************************************************************************************** PP
TIGR00110 488 ikiDienrkldlevseeelaerrakakkkearevkgaLakyaklvssadkGavld 542
i+iD++nr+l+++ e+ la+rr++ ++ +a+ + g+La+y+ lv+sa++G+v++
VIMSS114075 502 ITIDLTNRTLNVNQPEDVLARRRESLTPFKAKVKTGYLARYTALVTSANTGGVMQ 556
*****************************************************97 PP
Or compare VIMSS114075 to CDD or PaperBLAST