VIMSS116190 has 673 amino acids
Query: DUF1430 [M=100]
Accession: PF07242.15
Description: Protein of unknown function (DUF1430)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.5e-32 96.3 5.7 5.5e-32 96.3 5.7 3.8 4 VIMSS116190
Domain annotation for each sequence (and alignments):
>> VIMSS116190
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -2.5 0.4 0.36 0.36 45 58 .. 8 21 .. 2 33 .. 0.45
2 ? -2.1 0.3 0.26 0.26 72 81 .. 162 171 .. 147 185 .. 0.48
3 ! 8.1 6.7 0.00017 0.00017 29 100 .] 195 275 .. 190 275 .. 0.77
4 ! 96.3 5.7 5.5e-32 5.5e-32 1 100 [] 573 672 .. 573 672 .. 0.99
Alignments for each domain:
== domain 1 score: -2.5 bits; conditional E-value: 0.36
DUF1430 45 iiqlavlllllvli 58
+++++++++l+ +i
VIMSS116190 8 LSTFFLSFFLAWII 21
22223333322222 PP
== domain 2 score: -2.1 bits; conditional E-value: 0.26
DUF1430 72 lvlllielll 81
l+++ ++++
VIMSS116190 162 LAIFGLSFFA 171
2222222222 PP
== domain 3 score: 8.1 bits; conditional E-value: 0.00017
DUF1430 29 krifGyslfkrhkeyliiqlavlllllvlifiltk.........ekiillvvlvlllielllillvqekkekkkfisvlKG 100
+i G+sl + k++l++ l+++l + v++f + i++ +l+ll i++ll+ll++++++ k ++ v+KG
VIMSS116190 195 LSIMGHSLSTDIKWLLLSALLSFLGGGVVLFSQGLfypillatyGFGISFYLLFLLAISILLMLLYLMSLSYKALVPVIKG 275
5799999999999999999998887777666443321111112356677889999*************************9 PP
== domain 4 score: 96.3 bits; conditional E-value: 5.5e-32
DUF1430 1 illlalslllivllvllYFeqfkkkilikrifGyslfkrhkeyliiqlavlllllvlifiltkekiillvvlvlllielllillvqekkekkkfisvl 98
i+++a+slll+++++llYFeqf+++ilikri+G+++f++h +y+++q+a++++++ l+++++++ +i l++l+++l +++l+l++q++ke++ +++++
VIMSS116190 573 IVGIASSLLLFYSVNLLYFEQFRRDILIKRISGLRFFETHAQYMVSQFASFVFGASLFILSSRDLVIGLLTLLVFLASAVLTLYRQAQKESRVSMTIM 670
899*********************************************************************************************** PP
DUF1430 99 KG 100
KG
VIMSS116190 671 KG 672
*9 PP
Or compare VIMSS116190 to CDD or PaperBLAST