VIMSS1165188 has 331 amino acids
Query: DUF4352 [M=122]
Accession: PF11611.13
Description: Domain of unknown function (DUF4352)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.2e-33 102.2 5.3 1.2e-33 102.2 5.3 2.5 2 VIMSS1165188
Domain annotation for each sequence (and alignments):
>> VIMSS1165188
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 102.2 5.3 1.2e-33 1.2e-33 1 122 [] 81 214 .. 81 214 .. 0.94
2 ? -1.4 3.9 0.15 0.15 21 76 .. 218 275 .. 209 295 .. 0.44
Alignments for each domain:
== domain 1 score: 102.2 bits; conditional E-value: 1.2e-33
BSTCEEECCTTEEEEEEEE..EEEETTS-CEETT--SEEEEEEEEEEE-SSS-EEEEGGGEEEEETTEEE-BEEESCCCCTTB.........--EEE CS
DUF4352 1 ykvgetvkvgdlevtvnsv..aksvgeneylkpkagneflivdvtveNkgkealtvnssqfkLkdgdgkeydadlsasskadd.........lflgt 86
+k+getvk +dlevtvnsv +ksvg + ++a++ f+++dvt++Nkgkealt++ss+fkLk+gd k+++ad + s++a++ +fl++
VIMSS1165188 81 HKIGETVKNDDLEVTVNSVetMKSVG-PSLAPTNAKGIFVVADVTIKNKGKEALTIDSSMFKLKSGD-KTFEADNTGSMSANQsdngsiensFFLQR 175
68*****************9888899.999999*******************************999.************99999************ PP
E-TT-EEEEEEEEEESTT-CG...EEEEE-HBBTTTHHH CS
DUF4352 87 lnpgeevsGkivFevpkgakk...leLeystsifsgkki 122
+np+++ +GkivF+v+++ + +Le+ +s+fs kki
VIMSS1165188 176 INPDSTAQGKIVFDVSENIANakdKKLEVISSLFSVKKI 214
****************987776669****9999998875 PP
== domain 2 score: -1.4 bits; conditional E-value: 0.15
EEETTS-CEETT--SEEEEEEEEEEE-SSS-EEEEGG...GEEEEETTEEE-BEEESCC CS
DUF4352 21 ksvgeneylkpkagneflivdvtveNkgkealtvnss...qfkLkdgdgkeydadlsas 76
s+ +++ k+k++++ v v+ N ++ + +++ ++ d+d++ ++ +++++
VIMSS1165188 218 LSDA-KKTSKAKKDKQDTEVAVASSNSDNVNYEASATtpaTTSSADTDSEDSEKSSKDE 275
3444.455555555555555555555555555444432002222222222222222222 PP
Or compare VIMSS1165188 to CDD or PaperBLAST