VIMSS117543 has 567 amino acids
Query: TIGR00110 [M=543]
Accession: TIGR00110
Description: ilvD: dihydroxy-acid dehydratase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.5e-218 712.6 4.7 1.8e-218 712.4 4.7 1.0 1 VIMSS117543
Domain annotation for each sequence (and alignments):
>> VIMSS117543
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 712.4 4.7 1.8e-218 1.8e-218 1 542 [. 20 557 .. 20 558 .. 0.99
Alignments for each domain:
== domain 1 score: 712.4 bits; conditional E-value: 1.8e-218
TIGR00110 1 aarallkatGlkdedlekPiiavvnsyteivPghvhlkdlaklvkeeieaaGgvakefntiavsDGiamgheGmkysLpsreiiaDsvetvvkahalD 98
++ra+l+atG++d+d+e i++v++++ e +P+++hl+d++kl+ke++++aG+ +++f+ti+v+DGiamg+ Gm++sL+sr+iiaDs+e+ +++h +D
VIMSS117543 20 PNRAMLRATGMTDKDFETSIVGVISTWAENTPCNIHLHDFGKLAKEGVKSAGAWPVQFGTITVADGIAMGTPGMRFSLTSRDIIADSIEAAMSGHNVD 117
68************************************************************************************************ PP
TIGR00110 99 alvvissCDkivPGmlmaalrlniPaivvsGGpmeagktklsekidlvdvfeavgeyaagklseeeleeiersacPtagsCsGlftansmacltealG 196
a v+i+ CDk++PG ++a + ++iPai+ +GG++++g++ +++idlv+vfe++g+ + g+++ e+++++e +acP++g C+G++tan+ma++ e+lG
VIMSS117543 118 AFVAIGGCDKNMPGSMIAIANMDIPAIFAYGGTIAPGNLD-GKDIDLVSVFEGIGKWNHGDMTAEDVKRLECNACPGPGGCGGMYTANTMATAIEVLG 214
****************************************.9******************************************************** PP
TIGR00110 197 lslPgsstllatsaekkelakksgkrivelvkknikPrdiltkeafenaitldlalGGstntvLhllaiakeagvklslddfdrlsrkvPllaklkPs 294
+slPgss+ +a sa+kke ++ +g+ +v++++ +kP+dilt+eafe+ait+ +alGGstn++Lhllaia+ a+v+lsl+df++++++vP+la+lkPs
VIMSS117543 215 MSLPGSSSHPAESADKKEDIEAAGRAVVKMLELGLKPSDILTREAFEDAITVTMALGGSTNATLHLLAIAHAANVDLSLEDFNTIQERVPHLADLKPS 312
************************************************************************************************** PP
TIGR00110 295 gkkviedlhraGGvsavlkeldkegllhkdaltvtGktlaetlekvkvlrvdqdvirsldnpvkkegglavLkGnlaeeGavvkiagveedilkfeGp 392
g++v +dl ++GGv+av+k+l +g lh d +t+tGkt+ae+l++ l+ +q+vi +l+np +++g l +L Gnla++Gav+k++gv+ ++ Gp
VIMSS117543 313 GQYVFQDLYEVGGVPAVMKYLLANGFLHGDRITCTGKTVAENLADFADLTPGQKVIMPLENPKRADGPLIILNGNLAPDGAVAKVSGVKV--RRHVGP 408
****************************************************************************************87..9***** PP
TIGR00110 393 akvfeseeealeailggkvkeGdvvviryeGPkGgPGmremLaPtsalvglGLgkkvaLitDGrfsGgtrGlsiGhvsPeaaegGaialvedGDkiki 490
akvf+see+a++a+l+ ++ +Gdvvv+r+ GPkGgPGm+emL +s++vg G g+kvaL+tDGrfsGgt+Gl++Gh++Pea gG+ia ++ GD++++
VIMSS117543 409 AKVFDSEEDAIQAVLTDEIVDGDVVVVRFVGPKGGPGMPEMLSLSSMIVGKGQGDKVALLTDGRFSGGTYGLVVGHIAPEAQDGGPIAYLRTGDIVTV 506
************************************************************************************************** PP
TIGR00110 491 DienrkldlevseeelaerrakakkkearevkgaLakyaklvssadkGavld 542
D + +++ ++vseeel++r+a+++ + + +g+L kya++vssa++Gav+d
VIMSS117543 507 DQDTKEISMAVSEEELEKRKAETTLPP-LYSRGVLGKYAHIVSSASRGAVTD 557
**********************99998.78********************87 PP
Or compare VIMSS117543 to CDD or PaperBLAST