VIMSS1206623 has 1209 amino acids
Query: Met_synt_B12 [M=273]
Accession: PF02965.22
Description: Vitamin B12 dependent methionine synthase, activation domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.9e-36 110.3 0.0 8.7e-36 109.8 0.0 1.3 1 VIMSS1206623
Domain annotation for each sequence (and alignments):
>> VIMSS1206623
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 109.8 0.0 8.7e-36 8.7e-36 2 256 .. 960 1208 .. 959 1209 .] 0.86
Alignments for each domain:
== domain 1 score: 109.8 bits; conditional E-value: 8.7e-36
Met_synt_B12 2 leelveyidWtpffq.awelkgkypkiledekvgeeakklfkdAqamLkkiieekllkakavvglfpansvgddievyadesrseelatlhtLrq 95
+ee+ ++d + f+ w+l+ ++ +de + ++k q+ +++ +e+ll+ +a++g fp ++g+ + v+ d s ++el ++ + rq
VIMSS1206623 960 IEEVFGFLDRNALFAgQWQLRKV-QQQSRDEYDAMLKEKAEPVLQQWVDRCLQESLLTPRAAYGYFPVGRDGNALRVF-DASGETELGRFDLPRQ 1052
78888889988877647999866.44444554555555555555666667778999*********************8.7887888999999999 PP
Met_synt_B12 96 qaekeegepnlclaDfvapkesgv..kDyiGlfavtaglgieelakefeaeeDdYsa.ilvkalaDrLaeAfaellhekvrkelWgyakdeklsn 187
+ + +c+aDf ++ +++ D++ + avt+g +++e+a+e+ + D+Ys+ + ++ la +aeA+ae++h+++r+e g+a + +
VIMSS1206623 1053 RS-----GNRYCIADFFQDMTADGrpGDVLPMQAVTMGDKASEVAQELFKG-DQYSDyLYFHGLAVQMAEAMAEWVHARIRRE-LGFADPDGMPL 1140
84.....568*******9876543237*******************99887.99997255799*******************9.69********* PP
Met_synt_B12 188 eelikekYqGiRpApGYpacpdhsekktlfelldaeekigieLteslamtPaasvsGlyfahpeskyFa 256
+++++++Y+G R+++GYpacp+ +++ ++l a++ ig+++ s + P++s +l+ h +++yF+
VIMSS1206623 1141 RDVLAQRYRGSRYSFGYPACPNVADSRQQLSWLGADR-IGLSMDASDQLSPEQSTTALVALHSKARYFS 1208
************************************9.******************************7 PP
Or compare VIMSS1206623 to CDD or PaperBLAST