VIMSS1206623 has 1209 amino acids
Query: Met_synt_B12 [M=273]
Accession: PF02965.21
Description: Vitamin B12 dependent methionine synthase, activation domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.2e-36 111.7 0.0 3.3e-36 111.1 0.0 1.3 1 VIMSS1206623
Domain annotation for each sequence (and alignments):
>> VIMSS1206623
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 111.1 0.0 3.3e-36 3.3e-36 2 256 .. 960 1208 .. 959 1209 .] 0.87
Alignments for each domain:
== domain 1 score: 111.1 bits; conditional E-value: 3.3e-36
Met_synt_B12 2 leelveyidWtpffq.aWelkgkypkiledekvgeeakklfkdAqamLkkiieekllkakavvglfpAnsegddievyadesrseelatlhtLrq 95
+ee+ ++d + f+ W+l++ ++ +de + ++k q+ +++ +e+ll+ +a++g fp ++g+ + v+ d s ++el ++ + rq
VIMSS1206623 960 IEEVFGFLDRNALFAgQWQLRKV-QQQSRDEYDAMLKEKAEPVLQQWVDRCLQESLLTPRAAYGYFPVGRDGNALRVF-DASGETELGRFDLPRQ 1052
78888999988877647999876.44455555555555555555666677778999*********************8.8888888999999999 PP
Met_synt_B12 96 qaekeegkpnlclaDfvapkesgv..kDyiGlFavtaglgieelakefeaekddYsa.ilvkaladrLaeAfaellhekvrkelWgyakdeklsn 187
+ + +c+aDf ++ +++ D++ + avt+g +++e+a+e+ + d+Ys+ + + la ++aeA+ae++h+++r+e g+a + +
VIMSS1206623 1053 RSG-----NRYCIADFFQDMTADGrpGDVLPMQAVTMGDKASEVAQELFKG-DQYSDyLYFHGLAVQMAEAMAEWVHARIRRE-LGFADPDGMPL 1140
844.....58*******9876543247*******************99887.99997255799*******************9.69********* PP
Met_synt_B12 188 eelikekYqgiRpApGYpacpdhtekktlfelldaeekigieLteslamtPaasvsGlyfahpearyFa 256
+++++++Y+g R+++GYpacp+ +++ + l a++ ig+++ s + P++s +l+ h +aryF+
VIMSS1206623 1141 RDVLAQRYRGSRYSFGYPACPNVADSRQQLSWLGADR-IGLSMDASDQLSPEQSTTALVALHSKARYFS 1208
************************************9.******************************7 PP
Or compare VIMSS1206623 to CDD or PaperBLAST