VIMSS120766 has 552 amino acids
Query: TIGR00110 [M=543]
Accession: TIGR00110
Description: ilvD: dihydroxy-acid dehydratase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
8.6e-243 792.7 9.0 1e-242 792.5 9.0 1.0 1 VIMSS120766
Domain annotation for each sequence (and alignments):
>> VIMSS120766
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 792.5 9.0 1e-242 1e-242 1 541 [. 14 547 .. 14 549 .. 0.99
Alignments for each domain:
== domain 1 score: 792.5 bits; conditional E-value: 1e-242
TIGR00110 1 aarallkatGlkdedlekPiiavvnsyteivPghvhlkdlaklvkeeieaaGgvakefntiavsDGiamgheGmkysLpsreiiaDsvetvvkahalD 98
++r+l+ka+G+ de++++P+i+++nsy+e++Pgh++l+++ k+vk++i+ aGgv++ef+ti+v+DGi+m+h+Gm ysLpsr+iiaDsve v+kahalD
VIMSS120766 14 PHRSLFKALGFIDEEMDRPLIGIANSYSELIPGHMNLDKIVKAVKDGIRMAGGVPVEFGTIGVCDGISMNHKGMSYSLPSRQIIADSVEIVAKAHALD 111
69************************************************************************************************ PP
TIGR00110 99 alvvissCDkivPGmlmaalrlniPaivvsGGpmeagktklsekidlvdvfeavgeyaagklseeeleeiersacPtagsCsGlftansmacltealG 196
+lv++++CDk+vPGmlmaa r+niP+iv+sGGpm +g+t+ ++ dl +vfeavg+++agk+s eel e+e++acPt+gsCsG+ftansm+cl+e+lG
VIMSS120766 112 GLVLVPNCDKVVPGMLMAAGRVNIPSIVISGGPMLSGRTN-GRVTDLNSVFEAVGAVSAGKMSLEELAELENTACPTCGSCSGMFTANSMNCLSEVLG 208
****************************************.9******************************************************** PP
TIGR00110 197 lslPgsstllatsaekkelakksgkrivelvkknikPrdiltkeafenaitldlalGGstntvLhllaiakeagvklslddfdrlsrkvPllaklkPs 294
l+lP+++t++a+ +e+++lakk+g++ivelv+k+i+P+dilt++af na+++d+alGGstn+ Lhl+aia e +v++++d+++++s+k+P+++kl+P+
VIMSS120766 209 LALPYNGTIPAVFSERLRLAKKAGMKIVELVQKDIRPSDILTEAAFMNAVAMDMALGGSTNSLLHLPAIAYECDVDINFDKINEISEKIPHVCKLSPA 306
************************************************************************************************** PP
TIGR00110 295 gkkviedlhraGGvsavlkeldkegllhkdaltvtGktlaetlekvkvlrvdqdvirsldnpvkkegglavLkGnlaeeGavvkiagveedilkfeGp 392
g + iedlh aGG++av++ + k+gll+ +++tvtGktl+e+++++k++ + dvir +dnp++++ggl vL+Gnla++Ga+vk a+v+ ++++++Gp
VIMSS120766 307 GFHHIEDLHMAGGIPAVVNGIIKKGLLNGECMTVTGKTLYENVKDAKIK--NIDVIR-IDNPYSETGGLSVLRGNLAPDGAIVKKAAVAPEMMQHTGP 401
************************************************9..99***8.8*************************************** PP
TIGR00110 393 akvfeseeealeailggkvkeGdvvviryeGPkGgPGmremLaPtsalvglGLgkkvaLitDGrfsGgtrGlsiGhvsPeaaegGaialvedGDkiki 490
a+vf+seee+ +ailggk++ GdvvviryeGPkGgPGm+emL Pt+ l+g+GL+k+vaLitDGrfsG+trG siGhvsPeaaegG+i+lve+GD+i+i
VIMSS120766 402 ARVFNSEEEVSKAILGGKINPGDVVVIRYEGPKGGPGMKEMLSPTASLAGMGLDKSVALITDGRFSGATRGASIGHVSPEAAEGGPIGLVEEGDTIEI 499
************************************************************************************************** PP
TIGR00110 491 DienrkldlevseeelaerrakakkkearevkgaLakyaklvssadkGavl 541
Die+++++l v ee l++r+ ++++k vkg+L+ y++ vssa +Gav
VIMSS120766 500 DIEKKTINLLVPEEKLKNRKPEKVEKP---VKGYLNTYRQGVSSACTGAVF 547
*******************99888877...89*****************97 PP
Or compare VIMSS120766 to CDD or PaperBLAST