VIMSS120912 has 158 amino acids
Query: DUF3237 [M=149]
Accession: PF11578.12
Description: Protein of unknown function (DUF3237)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.8e-49 152.9 0.0 3.1e-49 152.7 0.0 1.0 1 VIMSS120912
Domain annotation for each sequence (and alignments):
>> VIMSS120912
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 152.7 0.0 3.1e-49 3.1e-49 3 149 .] 11 157 .. 9 157 .. 0.96
Alignments for each domain:
== domain 1 score: 152.7 bits; conditional E-value: 3.1e-49
DUF3237 3 lepaftlrvkldapievgegpe.gsrrivpitgGtvkgpklkgevlpgGaDwqtvdpdgtarldaryvlktddGaliyvrytGvltgppevlavlagg 99
e +f++++++d+pi +g+ + g+r+++pi++G+v+g++++g+vlpgG D q v+pdg+++l+ary ++ ddGa iy++++G++t+p+e+ ++++ g
VIMSS120912 11 YEEVFSITITVDKPILIGQDDIvGRRQLIPIISGKVSGNNFNGKVLPGGIDSQIVRPDGKCELSARYAIRLDDGAAIYIENNGIRTVPDEYIEAVKSG 108
5789***************5555*************************************************************************** PP
DUF3237 100 ekvdsptdyyfrthprfetgdekykwLnrkvfvGsgrrrpdgveydvyrv 149
e ++p+ yyfrt p+fet ++kykw+ +++fv+ ++r p++v +++y++
VIMSS120912 109 E-FVDPNAYYFRTIPTFETYSPKYKWMMNHIFVCCASRLPENVLLKFYKI 157
*.777*******************************************86 PP
Or compare VIMSS120912 to CDD or PaperBLAST