VIMSS120912 has 158 amino acids
Query: DUF3237 [M=149]
Accession: PF11578.13
Description: Protein of unknown function (DUF3237)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.1e-48 150.9 0.0 1.3e-48 150.7 0.0 1.0 1 VIMSS120912
Domain annotation for each sequence (and alignments):
>> VIMSS120912
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 150.7 0.0 1.3e-48 1.3e-48 3 149 .] 11 157 .. 9 157 .. 0.96
Alignments for each domain:
== domain 1 score: 150.7 bits; conditional E-value: 1.3e-48
EEEEEEEEEEE---EEEEEETT.EEEEEEEEEEEEEESTT--EEE-ST-EEEEEE-TTS-EEEEEEEEEEETTS-EEEEEEEEEEE--GGGHHHHHHT CS
DUF3237 3 lepaftlrvkldapievgegpe.gsrrivpitgGtvkgpklkgevlpgGaDwqtvdpdgtarldaryvlktddGaliyvrytGvltlppevlavlagg 99
e +f +++++d+pi +g+++ g+r+++pi +G+v+g++++g+vlpgG D q v+pdg+++l+ary ++ ddGa iy++++G++t+p+e+ ++++ g
VIMSS120912 11 YEEVFSITITVDKPILIGQDDIvGRRQLIPIISGKVSGNNFNGKVLPGGIDSQIVRPDGKCELSARYAIRLDDGAAIYIENNGIRTVPDEYIEAVKSG 108
5789***************5555*************************************************************************** PP
-.---GGG-EEEEEEEEEESSGGGGGGGSS-EEEEEEEESSEEEEEEEEE CS
DUF3237 100 ekvdsptdyyfrthprfetgdekykwLnrkvfvGsgrrrvegveydvyrv 149
e ++p+ yyfrt p+fet ++kykw+ +++fv+ ++r +e+v++++y++
VIMSS120912 109 E-FVDPNAYYFRTIPTFETYSPKYKWMMNHIFVCCASRLPENVLLKFYKI 157
*.778*******************************************86 PP
Or compare VIMSS120912 to CDD or PaperBLAST